CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g043612m.g
(
Citrus sinensis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
orange1.1g043612m.g
T288919_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC
GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.688
0.762
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.688
0.762
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.688
0.762
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g043612m
Myb
14
61
RGLWSPEEDEKLINYVTTYGHGCWSSVPKHAGLQRCGKSCRLRWINYL
orange1.1g043612m
Myb
67
103
RGSFSPQEAALIIELHSILGNRWAQIARHLPGRTDNE
Links
Other
Myb/SANT
family TFs
Other
Citrus sinensis
TFs
193 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy