CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g046093m.g
(
Citrus sinensis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
orange1.1g046093m.g
T288936_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.687
0.817
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.670
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g046093m
Myb
14
61
KGKWTAKEDEILTKYIQANGIESWRSLPKKAGLLRCGKSCRLRWVNYL
orange1.1g046093m
Myb
67
112
RGNITTEEEETIIKLHASLGNRWSVIASHLPGRTDNELKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Citrus sinensis
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10023756m.g
Citrus clementina
Ciclev10023756m.g
I
0.909
Ciclev10005376m.g
Citrus clementina
Ciclev10005376m.g
I
0.765
orange1.1g041081m.g
Citrus sinensis
orange1.1g041081m.g
I
0.765
GLYMA02G01740
Glycine max
GLYMA02G01740
I
0.761
chr5.CM0239.580.nc
Lotus japonicus
chr5.CM0239.580.nc
I
0.755
cassava40469.m1
Manihot esculenta
cassava40469.m1
I
0.744
mgf024278m
Mimulus guttatus
mgf024278m
I
0.741
PDK_20s1388491g004
Phoenix dactylifera
PDK_20s1388491g004
I
0.741
MDP0000119725
Malus domestica
MDP0000119725
I
0.735
MDP0000607330
Malus domestica
MDP0000607330
I
0.735
POPTR_0002s19920
Populus trichocarpa
POPTR_0002s19920
I
0.734
orange1.1g014829m.g
Citrus sinensis
orange1.1g014829m.g
I
0.733
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.733
POPTR_0014s11780
Populus trichocarpa
POPTR_0014s11780
I
0.732
SapurV1A.0180s0510
Salix purpurea
SapurV1A.0180s0510
I
0.729
Cla017646
Citrullus lanatus
Cla017646
I
0.728
mgf003233m
Mimulus guttatus
mgf003233m
I
0.727
cassava24756.valid.m1
Manihot esculenta
cassava24756.valid.m1
I
0.722
Gorai.007G124000
Gossypium raimondii
Gorai.007G124000
I
0.719
Ca_03498
Cicer arietinum
Ca_03498
I
0.716
VIT_07s0005g01210
Vitis vinifera
VIT_07s0005g01210
I
0.716
Cucsa.252700
Cucumis sativus
Cucsa.252700
I
0.716
MTR_7g109320
Medicago truncatula
MTR_7g109320
I
0.715
TCM_021318
Theobroma cacao
TCM_021318
I
0.713
Bo7g092680
Brassica oleracea
Bo7g092680
I
0.712
Cagra.6296s0007
Capsella grandiflora
Cagra.6296s0007
I
0.712
Bra037419
Brassica rapa
Bra037419
I
0.712
Carubv10026694m.g
Capsella rubella
Carubv10026694m.g
I
0.712
Lus10002435.g
Linum usitatissimum
Lus10002435.g
I
0.710
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.710
GSMUA_AchrUn_randomG12700_001
Musa acuminata
GSMUA_AchrUn_randomG12700_001
I
0.710
Gorai.011G195100
Gossypium raimondii
Gorai.011G195100
I
0.710
GSMUA_Achr5G21250_001
Musa acuminata
GSMUA_Achr5G21250_001
I
0.710
TCM_004777
Theobroma cacao
TCM_004777
I
0.709
GLYMA03G37640
Glycine max
GLYMA03G37640
I
0.709
VIT_05s0077g01360
Vitis vinifera
VIT_05s0077g01360
I
0.708
Aquca_003_00583
Aquilegia coerulea
Aquca_003_00583
I
0.708
Eucgr.H01058
Eucalyptus grandis
Eucgr.H01058
I
0.705
POPTR_0010s15090
Populus trichocarpa
POPTR_0010s15090
I
0.703
gene02324-v1.0-hybrid
Fragaria vesca
gene02324-v1.0-hybrid
I
0.702
Gorai.008G141000
Gossypium raimondii
Gorai.008G141000
I
0.700
Pm008294
Prunus mume
Pm008294
I
0.699
GLYMA19G40250
Glycine max
GLYMA19G40250
I
0.699
PRUPE_ppa007594mg
Prunus persica
PRUPE_ppa007594mg
I
0.699
TCM_037555
Theobroma cacao
TCM_037555
I
0.697
SapurV1A.0158s0390
Salix purpurea
SapurV1A.0158s0390
I
0.697
Cucsa.069500
Cucumis sativus
Cucsa.069500
I
0.696
PRUPE_ppa004560mg
Prunus persica
PRUPE_ppa004560mg
I
0.696
Cla022107
Citrullus lanatus
Cla022107
I
0.696
gene05167-v1.0-hybrid
Fragaria vesca
gene05167-v1.0-hybrid
I
0.694
Lus10001458.g
Linum usitatissimum
Lus10001458.g
I
0.694
MTR_2g034790
Medicago truncatula
MTR_2g034790
I
0.693
SapurV1A.0050s0720
Salix purpurea
SapurV1A.0050s0720
I
0.693
Gorai.003G054100
Gossypium raimondii
Gorai.003G054100
I
0.691
GLYMA10G01801
Glycine max
GLYMA10G01801
I
0.687
MYB111
Arabidopsis thaliana
AT5G49330
D
0.687
MYB111
Arabidopsis lyrata
scaffold_801313.1
I
0.687
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.684
Cagra.13170s0007
Capsella grandiflora
Cagra.13170s0007
I
0.683
Carubv10019345m.g
Capsella rubella
Carubv10019345m.g
I
0.683
GLYMA17G03480
Glycine max
GLYMA17G03480
I
0.680
PK16958.1
Cannabis sativa
PK16958.1
I
0.680
MTR_4g121460
Medicago truncatula
MTR_4g121460
I
0.680
Thhalv10004518m.g
Eutrema salsugineum
Thhalv10004518m.g
I
0.678
evm.TU.supercontig_9.95
Carica papaya
evm.TU.supercontig_9.95
I
0.678
Bra036145
Brassica rapa
Bra036145
I
0.678
Cla009418
Citrullus lanatus
Cla009418
I
0.675
Solyc06g009710.2
Solanum lycopersicum
Solyc06g009710.2
I
0.674
Pavir.Ib01420
Panicum virgatum
Pavir.Ib01420
I
0.673
GLYMA07G37142
Glycine max
GLYMA07G37142
I
0.673
GLYMA09G04370
Glycine max
GLYMA09G04370
I
0.673
Si039538m.g
Setaria italica
Si039538m.g
I
0.673
Si002107m.g
Setaria italica
Si002107m.g
I
0.672
Bostr.15774s0064
Boechera stricta
Bostr.15774s0064
I
0.672
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.672
PK06182.1
Cannabis sativa
PK06182.1
D
0.670
evm.TU.supercontig_18.11
Carica papaya
evm.TU.supercontig_18.11
I
0.667
Thhalv10006080m.g
Eutrema salsugineum
Thhalv10006080m.g
I
0.666
PGSC0003DMG400007304
Solanum tuberosum
PGSC0003DMG400007304
I
0.665
GLYMA07G07960
Glycine max
GLYMA07G07960
I
0.664
cassava24925.valid.m1
Manihot esculenta
cassava24925.valid.m1
I
0.664
TCM_021317
Theobroma cacao
TCM_021317
I
0.664
GLYMA15G15400
Glycine max
GLYMA15G15400
I
0.664
cassava34465.m1
Manihot esculenta
cassava34465.m1
I
0.662
Cucsa.318610
Cucumis sativus
Cucsa.318610
I
0.661
Bra000453
Brassica rapa
Bra000453
I
0.661
TRIUR3_31689
Triticum urartu
TRIUR3_31689
I
0.661
Traes_4DL_967152326
Triticum aestivum
Traes_4DL_967152326
I
0.661
Thhalv10001498m.g
Eutrema salsugineum
Thhalv10001498m.g
I
0.661
Carubv10024801m.g
Capsella rubella
Carubv10024801m.g
I
0.661
MLOC_57220
Hordeum vulgare
MLOC_57220
I
0.661
Bostr.25993s0011
Boechera stricta
Bostr.25993s0011
I
0.661
Traes_4AS_3883DC244
Triticum aestivum
Traes_4AS_3883DC244
I
0.661
TCM_025488
Theobroma cacao
TCM_025488
I
0.661
Cla013211
Citrullus lanatus
Cla013211
I
0.661
Lus10036336.g
Linum usitatissimum
Lus10036336.g
I
0.661
F775_11235
Aegilops tauschii
F775_11235
I
0.661