Pavir.Aa01543 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Aa01543 T288974_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa01543.1.p Myb 15 62
Pavir.Aa01543.1.p Myb 68 93

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Traes_2BL_216652F6B Triticum aestivum Traes_2BL_216652F6B N 0.810
OS08G0433400 Oryza sativa OS08G0433400 N 0.745
Lus10030442.g Linum usitatissimum Lus10030442.g N 0.743
evm.TU.supercontig_1993.2 Carica papaya evm.TU.supercontig_1993.2 N 0.722
Traes_2AL_839C94CA3 Triticum aestivum Traes_2AL_839C94CA3 N 0.719
PRUPE_ppa018086mg Prunus persica PRUPE_ppa018086mg N 0.713
e_gw1.389.24.1 Physcomitrella patens e_gw1.389.24.1 N 0.695
Ca_16645 Cicer arietinum Ca_16645 N 0.682
GLYMA05G17994 Glycine max GLYMA05G17994 N 0.682
evm.TU.supercontig_29.114 Carica papaya evm.TU.supercontig_29.114 N 0.680
ORGLA02G0218900 Oryza glaberrima ORGLA02G0218900 N 0.670
evm.TU.supercontig_43.122 Carica papaya evm.TU.supercontig_43.122 N 0.667
mgf004018m Mimulus guttatus mgf004018m N 0.667
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N 0.667
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N 0.667
Traes_6DL_D1B5EA05F Triticum aestivum Traes_6DL_D1B5EA05F N 0.666