TF Information

Pavir.Ab00649 *(Panicum virgatum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Pavir.Ab00649	T288990_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
OS02G0187700 M02327_2.00	Oryza sativa	NTAMCKGTHN	NDACMGKTAN	PBM Weirauch et al.(2014) pTH8645	0.883	0.968
MYB1 M07068_2.00	Arabidopsis thaliana	HDNNDNHWHWAACSGYHWH	DWDRCSGTTWDWDNHNNHD	Dap-seq OMalley et al.(2016) MYB1_col_a	0.734	0.742
PK07741.1 M01277_2.00	Cannabis sativa	HAMCBRHHN	NDDYVGKTD	PBM Lambert et al.(2019) pTH11469	0.726	0.785
MYB44 M01082_2.00	Arabidopsis thaliana	HAACBRHHN	NDDYVGTTD	PBM Sullivan et al.(2014) pTH7078	0.667	0.763
MYB44 M07155_2.00	Arabidopsis thaliana	HDTAACBGWHW	WDWCVGTTAHD	Dap-seq OMalley et al.(2016) MYB44_colamp_a	0.667	0.763
MYB44 M07156_2.00	Arabidopsis thaliana	HAACBRWHWWAACBGHHWH	DWDDCVGTTWWDWYVGTTD	Dap-seq OMalley et al.(2016) MYB44_col	0.667	0.763
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Ab00649.1.p	Myb	11	57	KGPWSPEEDEALRRLVERHGARNWTAIGRGIPGRSGKSCRLRWCNQL
Pavir.Ab00649.1.p	Myb	63	108	RRPFTPEEDTAILAAHARLGNRWAAIARLLPGRTDNAVKNHWNSSL

Links
Other Myb/SANT family TFs
Other *Panicum virgatum* TFs

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313 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action