Pavir.Ba01707 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ba01707 T289013_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01707.1.p Myb 25 79

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si029222m.g Setaria italica Si029222m.g N 0.867
GRMZM2G103783 Zea mays GRMZM2G103783 N 0.867
Sb02g028460 Sorghum bicolor Sb02g028460 N 0.851
ORUFI09G16000 Oryza rufipogon ORUFI09G16000 N 0.811
OS09G0491660 Oryza sativa OS09G0491660 N 0.811
OGLUM09G15460 Oryza glumaepatula OGLUM09G15460 N 0.811
ONIVA09G15440 Oryza nivara ONIVA09G15440 N 0.811
OB09G21390 Oryza brachyantha OB09G21390 N 0.785
OPUNC09G13290 Oryza punctata OPUNC09G13290 N 0.778
LPERR09G10970 Leersia perrieri LPERR09G10970 N 0.774
MLOC_75616 Hordeum vulgare MLOC_75616 N 0.743
BRADI4G33820 Brachypodium distachyon BRADI4G33820 N 0.737
Pavir.J33720 Panicum virgatum Pavir.J33720 N 0.729
Pavir.Fb01943 Panicum virgatum Pavir.Fb01943 N 0.727
Si013408m.g Setaria italica Si013408m.g N 0.725
OPUNC08G18190 Oryza punctata OPUNC08G18190 N 0.718
OS08G0510700 Oryza sativa OS08G0510700 N 0.707
LPERR08G16990 Leersia perrieri LPERR08G16990 N 0.696
ONIVA08G22660 Oryza nivara ONIVA08G22660 N 0.686
BGIOSGA026697 Oryza indica BGIOSGA026697 N 0.686
ORUFI08G22500 Oryza rufipogon ORUFI08G22500 N 0.686
OGLUM08G21320 Oryza glumaepatula OGLUM08G21320 N 0.686