CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba01707
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ba01707
T289013_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba01707.1.p
Myb
25
79
EIWGTLEELLLACAVTRHGTASWDSVAMEVQTRSPLAARPGLTPHSCHLRFRHLH
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si029222m.g
Setaria italica
Si029222m.g
N
0.867
GRMZM2G103783
Zea mays
GRMZM2G103783
N
0.867
Sb02g028460
Sorghum bicolor
Sb02g028460
N
0.851
ORUFI09G16000
Oryza rufipogon
ORUFI09G16000
N
0.811
OS09G0491660
Oryza sativa
OS09G0491660
N
0.811
OGLUM09G15460
Oryza glumaepatula
OGLUM09G15460
N
0.811
ONIVA09G15440
Oryza nivara
ONIVA09G15440
N
0.811
OB09G21390
Oryza brachyantha
OB09G21390
N
0.785
OPUNC09G13290
Oryza punctata
OPUNC09G13290
N
0.778
LPERR09G10970
Leersia perrieri
LPERR09G10970
N
0.774
MLOC_75616
Hordeum vulgare
MLOC_75616
N
0.743
BRADI4G33820
Brachypodium distachyon
BRADI4G33820
N
0.737
Pavir.J33720
Panicum virgatum
Pavir.J33720
N
0.729
Pavir.Fb01943
Panicum virgatum
Pavir.Fb01943
N
0.727
Si013408m.g
Setaria italica
Si013408m.g
N
0.725
OPUNC08G18190
Oryza punctata
OPUNC08G18190
N
0.718
OS08G0510700
Oryza sativa
OS08G0510700
N
0.707
LPERR08G16990
Leersia perrieri
LPERR08G16990
N
0.696
ONIVA08G22660
Oryza nivara
ONIVA08G22660
N
0.686
BGIOSGA026697
Oryza indica
BGIOSGA026697
N
0.686
ORUFI08G22500
Oryza rufipogon
ORUFI08G22500
N
0.686
OGLUM08G21320
Oryza glumaepatula
OGLUM08G21320
N
0.686