Pavir.Ba02286 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ba02286 T289019_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02286.1.p Myb 126 153

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa007491m2g Prunus persica PRUPE_ppa007491m2g N 0.799
evm.TU.supercontig_817.1 Carica papaya evm.TU.supercontig_817.1 N 0.799
Carubv10012777m.g Capsella rubella Carubv10012777m.g N 0.796
OPUNC08G10730 Oryza punctata OPUNC08G10730 N 0.794
orange1.1g038008m.g Citrus sinensis orange1.1g038008m.g N 0.794
BGIOSGA028509 Oryza indica BGIOSGA028509 N 0.782
OS08G0346400 Oryza sativa OS08G0346400 I 0.781
OGLUM08G12590 Oryza glumaepatula OGLUM08G12590 I 0.781
OLONG_004751 Oryza longistaminata OLONG_004751 N 0.767
LjSGA_102149.2 Lotus japonicus LjSGA_102149.2 N 0.765
Cla005572 Citrullus lanatus Cla005572 N 0.765
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.765
e_gw1.141.94.1 Physcomitrella patens e_gw1.141.94.1 N 0.749
Pavir.Fa01260 Panicum virgatum Pavir.Fa01260 N 0.744
Bra034737 Brassica rapa Bra034737 N 0.739
PGSC0003DMG400009304 Solanum tuberosum PGSC0003DMG400009304 I 0.721
LjSGA_045379.1 Lotus japonicus LjSGA_045379.1 N 0.718
F775_22357 Aegilops tauschii F775_22357 N 0.707
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.700
OMERI02G34900 Oryza meridionalis OMERI02G34900 N 0.693
OPUNC02G34240 Oryza punctata OPUNC02G34240 N 0.693
GRMZM2G162409 Zea mays GRMZM2G162409 I 0.689
30005.m001245 Ricinus communis 30005.m001245 N 0.682
PRUPE_ppa025217mg Prunus persica PRUPE_ppa025217mg N 0.670