TF Information

Pavir.Ca00957 *(Panicum virgatum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Pavir.Ca00957	T289060_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB57 M01072_2.00	Arabidopsis thaliana	RCCTAAYT	ARTTAGGY	PBM Sullivan et al.(2014) pTH9748	0.678	0.761
MYB57 M07059_2.00	Arabidopsis thaliana	YNTACCTAACTHHH	DDDAGTTAGGTANR	Dap-seq OMalley et al.(2016) MYB57_col_a	0.678	0.761
MYB57 M07060_2.00	Arabidopsis thaliana	ACCTAAY	RTTAGGT	Dap-seq OMalley et al.(2016) MYB57_colamp_a	0.678	0.761
MYB05_ANTMA M11067_2.00	Antirrhinum majus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYB305_Q3	0.663	0.761
MYB108 M07065_2.00	Arabidopsis thaliana	RCCWAAYYNNNNHNH	DNDNNNNRRTTWGGY	Dap-seq OMalley et al.(2016) BOS1_col_a	0.661	0.717
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Ca00957.1.p	Myb	28	75	KGPWTMEEDRVLVNYIAAHGEGAWNNLARAAGLNRTGKSCRLRWLNYL
Pavir.Ca00957.1.p	Myb	81	125	RGNMTAEEQELIVQLQARWGNKWSRIARHLPGRTDNEVKNFWRTK

Links
Other Myb/SANT family TFs
Other *Panicum virgatum* TFs

Invalid Input OrderBy

236 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action