Pavir.Ca01208 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ca01208 T289061_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01208.1.p Myb 139 186

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.857
BGIOSGA021814 Oryza indica BGIOSGA021814 N 0.760
F775_23301 Aegilops tauschii F775_23301 N 0.750
F775_23426 Aegilops tauschii F775_23426 N 0.750
TRIUR3_31433 Triticum urartu TRIUR3_31433 N 0.750
TRIUR3_33433 Triticum urartu TRIUR3_33433 N 0.750
Sb10g006570 Sorghum bicolor Sb10g006570 I 0.749
F775_03070 Aegilops tauschii F775_03070 I 0.741
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.733
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.723
Traes_7AS_6A126F5F5 Triticum aestivum Traes_7AS_6A126F5F5 N 0.710
F775_00072 Aegilops tauschii F775_00072 N 0.710
OB06G14480 Oryza brachyantha OB06G14480 N 0.709
MLOC_51337 Hordeum vulgare MLOC_51337 N 0.709
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.702
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.694
OPUNC06G04630 Oryza punctata OPUNC06G04630 N 0.693
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.691
ORUFI06G04910 Oryza rufipogon ORUFI06G04910 N 0.686
BGIOSGA021813 Oryza indica BGIOSGA021813 N 0.686
ORGLA06G0044400 Oryza glaberrima ORGLA06G0044400 N 0.686
ONIVA06G15050 Oryza nivara ONIVA06G15050 N 0.686
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.684
Si032172m.g Setaria italica Si032172m.g I 0.683
Pavir.J00200 Panicum virgatum Pavir.J00200 N 0.683
F775_23221 Aegilops tauschii F775_23221 N 0.676
Traes_1AL_FF8F7A939 Triticum aestivum Traes_1AL_FF8F7A939 N 0.676
MLOC_10707 Hordeum vulgare MLOC_10707 N 0.675
Pavir.J00201 Panicum virgatum Pavir.J00201 N 0.675
Sb10g005020 Sorghum bicolor Sb10g005020 I 0.670
LPERR06G04380 Leersia perrieri LPERR06G04380 N 0.665
BGIOSGA021812 Oryza indica BGIOSGA021812 N 0.664
OGLUM06G05040 Oryza glumaepatula OGLUM06G05040 N 0.664
ONIVA06G15070 Oryza nivara ONIVA06G15070 N 0.664
ORGLA06G0044500 Oryza glaberrima ORGLA06G0044500 N 0.664
ORUFI06G04920 Oryza rufipogon ORUFI06G04920 N 0.664
BGIOSGA021811 Oryza indica BGIOSGA021811 N 0.664
ONIVA06G15060 Oryza nivara ONIVA06G15060 N 0.664