TF Information

Pavir.Da02398 *(Panicum virgatum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Pavir.Da02398	T289093_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AtMYB17 M07099_2.00	Arabidopsis thaliana	YYYACCWACCWHHHH	DDDDWGGTWGGTRRR	Dap-seq OMalley et al.(2016) MYB17_colamp_a	0.701	0.753
MYB92 M07123_2.00	Arabidopsis thaliana	NHHACCTAMY	RKTAGGTDDN	Dap-seq OMalley et al.(2016) MYB92_100ng20cy_b	0.684	0.742
MYB92 M07124_2.00	Arabidopsis thaliana	NNNNWNNYYYACCWAMYHH	DDRKTWGGTRRRNNWNNNN	Dap-seq OMalley et al.(2016) MYB92_colamp_a	0.684	0.742
AtMYB93 M07020_2.00	Arabidopsis thaliana	HDNYYYAMCWAMYHHHHHHHH	DDDDDDDDRKTWGKTRRRNHD	Dap-seq OMalley et al.(2016) MYB93_col_a	0.671	0.774
AtMYB93 M07021_2.00	Arabidopsis thaliana	NNHNBYYYAMCWAMY	RKTWGKTRRRVNDNN	Dap-seq OMalley et al.(2016) MYB93_colamp_a	0.671	0.774
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Da02398.1.p	Myb	15	63	KGPWTPEEDKLLVDYIKDSKGHGSWRRLPKLAGLNRCGKSCRLRWTNYL
Pavir.Da02398.1.p	Myb	69	114	RGRFTDEEEKLIIHLHSILGNKWSSIATKLPGRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Panicum virgatum* TFs

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329 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action