Pavir.Ea02676 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea02676 T289136_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02676.1.p Myb 14 62
Pavir.Ea02676.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Eb02926 Panicum virgatum Pavir.Eb02926 N 0.875
Si004558m.g Setaria italica Si004558m.g N 0.871
Sb03g033160 Sorghum bicolor Sb03g033160 N 0.870
OB01G38240 Oryza brachyantha OB01G38240 N 0.861
F775_22853 Aegilops tauschii F775_22853 N 0.851
OBART01G29250 Oryza barthii OBART01G29250 N 0.844
OGLUM01G33320 Oryza glumaepatula OGLUM01G33320 N 0.844
OS01G0722300 Oryza sativa OS01G0722300 N 0.844
ORUFI01G32340 Oryza rufipogon ORUFI01G32340 N 0.844
BGIOSGA004364 Oryza indica BGIOSGA004364 N 0.844
GRMZM2G167829 Zea mays GRMZM2G167829 N 0.841
ONIVA01G33470 Oryza nivara ONIVA01G33470 N 0.833
TRAES3BF016200140CFD_g Triticum aestivum TRAES3BF016200140CFD_g N 0.833
GRMZM2G151205 Zea mays GRMZM2G151205 N 0.832
TRIUR3_05615 Triticum urartu TRIUR3_05615 N 0.822
F775_22442 Aegilops tauschii F775_22442 N 0.822
Traes_3AL_7C031019E Triticum aestivum Traes_3AL_7C031019E N 0.799
TRIUR3_25771 Triticum urartu TRIUR3_25771 N 0.793
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.702
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I 0.700
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I 0.700
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I 0.691
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N 0.689
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.688
TCM_037728 Theobroma cacao TCM_037728 I 0.688
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N 0.686
Si002629m.g Setaria italica Si002629m.g N 0.686
F775_22184 Aegilops tauschii F775_22184 I 0.683
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.683
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.681
MTR_6g090405 Medicago truncatula MTR_6g090405 I 0.680
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.678
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.675
Si022874m.g Setaria italica Si022874m.g I 0.675
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.667
Sb03g003120 Sorghum bicolor Sb03g003120 N 0.665
MLOC_67874 Hordeum vulgare MLOC_67874 N 0.664
mgf017404m Mimulus guttatus mgf017404m I 0.663
BGIOSGA004221 Oryza indica BGIOSGA004221 I 0.662
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.662
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I 0.662
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I 0.662
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I 0.662
GRMZM2G001875 Zea mays GRMZM2G001875 N 0.662
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.662
OBART01G26850 Oryza barthii OBART01G26850 I 0.662