Pavir.Ea03006 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea03006 T289137_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03006.1.p Myb 1 34

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G31280 Glycine max GLYMA16G31280 I 0.823
Traes_6AL_C0A2B4F041 Triticum aestivum Traes_6AL_C0A2B4F041 N 0.805
MYB28 Arabidopsis thaliana AT5G61420 I 0.802
PK07010.1 Cannabis sativa PK07010.1 N 0.793
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.783
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.774
PK18646.1 Cannabis sativa PK18646.1 N 0.772
GLYMA11G15180 Glycine max GLYMA11G15180 I 0.761
GLYMA12G07110 Glycine max GLYMA12G07110 I 0.761
PK15577.1 Cannabis sativa PK15577.1 N 0.758
fgenesh2_kg.397__1__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.397__1__AT3G24310.1 N 0.755
PDK_20s1741841g001 Phoenix dactylifera PDK_20s1741841g001 N 0.744
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.729
Gorai.004G064100 Gossypium raimondii Gorai.004G064100 I 0.721
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.716
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.716
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.716
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.716
Traes_2AL_E2F8D46CE Triticum aestivum Traes_2AL_E2F8D46CE N 0.712
MTR_6g055910 Medicago truncatula MTR_6g055910 I 0.709
PK00358.1 Cannabis sativa PK00358.1 N 0.708
VIT_11s0016g05650 Vitis vinifera VIT_11s0016g05650 N 0.688
OLONG_025203 Oryza longistaminata OLONG_025203 N 0.681
Traes_6BL_931C25F08 Triticum aestivum Traes_6BL_931C25F08 N 0.680
TRIUR3_12584 Triticum urartu TRIUR3_12584 N 0.680
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.674
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I 0.672
Cla012350 Citrullus lanatus Cla012350 N 0.670
OGLUM11G01380 Oryza glumaepatula OGLUM11G01380 N 0.669
GLYMA02G12254 Glycine max GLYMA02G12254 I 0.668
LjSGA_064890.1.1 Lotus japonicus LjSGA_064890.1.1 N 0.665