CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea03744
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ea03744
T289144_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea03744.1.p
Myb
21
67
ARPWSKAEDKVFEGALVMWPEHAPDRWALVAAQLPGRTPREAWEHYE
Pavir.Ea03744.1.p
Myb
124
169
PWSEEEHRLFLRGLQEYGRGDWRNISRFAVRTRTPTQVASHAQKYY
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J02275
Panicum virgatum
Pavir.J02275
N
0.849
Sb03g040730
Sorghum bicolor
Sb03g040730
N
0.819
Si003047m.g
Setaria italica
Si003047m.g
N
0.810
GRMZM2G143640
Zea mays
GRMZM2G143640
N
0.797
GRMZM2G027914
Zea mays
GRMZM2G027914
N
0.789
OBART01G38220
Oryza barthii
OBART01G38220
N
0.755
ORGLA01G0320500
Oryza glaberrima
ORGLA01G0320500
N
0.755
OGLUM01G42400
Oryza glumaepatula
OGLUM01G42400
N
0.755
BRADI2G55797
Brachypodium distachyon
BRADI2G55797
N
0.735
LPERR01G32800
Leersia perrieri
LPERR01G32800
N
0.733
GRMZM2G091201
Zea mays
GRMZM2G091201
N
0.726
BGIOSGA004852
Oryza indica
BGIOSGA004852
N
0.725
ORUFI01G41590
Oryza rufipogon
ORUFI01G41590
N
0.725
OS01G0863300
Oryza sativa
OS01G0863300
N
0.725
OPUNC01G36990
Oryza punctata
OPUNC01G36990
N
0.725
ONIVA01G42920
Oryza nivara
ONIVA01G42920
N
0.725
OMERI01G35110
Oryza meridionalis
OMERI01G35110
N
0.725
OPUNC05G16000
Oryza punctata
OPUNC05G16000
N
0.703
Sb09g021770
Sorghum bicolor
Sb09g021770
N
0.701
Si023363m.g
Setaria italica
Si023363m.g
N
0.700
TRAES3BF019300020CFD_g
Triticum aestivum
TRAES3BF019300020CFD_g
N
0.700
OS05G0442400
Oryza sativa
OS05G0442400
N
0.694
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
0.694
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
0.694
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
0.694
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
0.694
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
0.694
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
0.694
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
0.694
ORGLA05G0157700
Oryza glaberrima
ORGLA05G0157700
N
0.694
Pavir.J08778
Panicum virgatum
Pavir.J08778
N
0.691
LPERR05G14380
Leersia perrieri
LPERR05G14380
N
0.687
F775_31610
Aegilops tauschii
F775_31610
N
0.663