Pavir.Ea03744 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea03744 T289144_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03744.1.p Myb 21 67
Pavir.Ea03744.1.p Myb 124 169

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J02275 Panicum virgatum Pavir.J02275 N 0.849
Sb03g040730 Sorghum bicolor Sb03g040730 N 0.819
Si003047m.g Setaria italica Si003047m.g N 0.810
GRMZM2G143640 Zea mays GRMZM2G143640 N 0.797
GRMZM2G027914 Zea mays GRMZM2G027914 N 0.789
OBART01G38220 Oryza barthii OBART01G38220 N 0.755
ORGLA01G0320500 Oryza glaberrima ORGLA01G0320500 N 0.755
OGLUM01G42400 Oryza glumaepatula OGLUM01G42400 N 0.755
BRADI2G55797 Brachypodium distachyon BRADI2G55797 N 0.735
LPERR01G32800 Leersia perrieri LPERR01G32800 N 0.733
GRMZM2G091201 Zea mays GRMZM2G091201 N 0.726
BGIOSGA004852 Oryza indica BGIOSGA004852 N 0.725
ORUFI01G41590 Oryza rufipogon ORUFI01G41590 N 0.725
OS01G0863300 Oryza sativa OS01G0863300 N 0.725
OPUNC01G36990 Oryza punctata OPUNC01G36990 N 0.725
ONIVA01G42920 Oryza nivara ONIVA01G42920 N 0.725
OMERI01G35110 Oryza meridionalis OMERI01G35110 N 0.725
OPUNC05G16000 Oryza punctata OPUNC05G16000 N 0.703
Sb09g021770 Sorghum bicolor Sb09g021770 N 0.701
Si023363m.g Setaria italica Si023363m.g N 0.700
TRAES3BF019300020CFD_g Triticum aestivum TRAES3BF019300020CFD_g N 0.700
OS05G0442400 Oryza sativa OS05G0442400 N 0.694
ORUFI05G19340 Oryza rufipogon ORUFI05G19340 N 0.694
ONIVA05G19090 Oryza nivara ONIVA05G19090 N 0.694
ORUFI05G19330 Oryza rufipogon ORUFI05G19330 N 0.694
BGIOSGA017965 Oryza indica BGIOSGA017965 N 0.694
BGIOSGA017964 Oryza indica BGIOSGA017964 N 0.694
OGLUM05G19230 Oryza glumaepatula OGLUM05G19230 N 0.694
OGLUM05G19240 Oryza glumaepatula OGLUM05G19240 N 0.694
ORGLA05G0157700 Oryza glaberrima ORGLA05G0157700 N 0.694
Pavir.J08778 Panicum virgatum Pavir.J08778 N 0.691
LPERR05G14380 Leersia perrieri LPERR05G14380 N 0.687
F775_31610 Aegilops tauschii F775_31610 N 0.663