Pavir.Eb01665 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Eb01665 T289165_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb01665.1.p Myb 15 62
Pavir.Eb01665.1.p Myb 68 112

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.685
Pm015692 Prunus mume Pm015692 I 0.664
TRIUR3_25064 Triticum urartu TRIUR3_25064 I 0.729
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.719
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I 0.719
TCM_016901 Theobroma cacao TCM_016901 I 0.664
Si003965m.g Setaria italica Si003965m.g I 0.726
Si003841m.g Setaria italica Si003841m.g I 0.856
Sb03g029050 Sorghum bicolor Sb03g029050 I 0.725
cassava14740.m1 Manihot esculenta cassava14740.m1 I 0.665
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.662
Eucgr.I01782 Eucalyptus grandis Eucgr.I01782 I 0.667
SapurV1A.0358s0050 Salix purpurea SapurV1A.0358s0050 I 0.681
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.806
Pavir.J05460 Panicum virgatum Pavir.J05460 I 0.868
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.662
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.664
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I 0.664
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.664
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.693
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.664
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.681
LPERR01G20550 Leersia perrieri LPERR01G20550 I 0.728
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.665
GRMZM2G143328 Zea mays GRMZM2G143328 I 0.733
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.665
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.664
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.664
F775_02242 Aegilops tauschii F775_02242 I 0.719
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I 0.736
MLOC_5568 Hordeum vulgare MLOC_5568 I 0.726
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.662
OB01G33330 Oryza brachyantha OB01G33330 I 0.750
OS01G0637800 Oryza sativa OS01G0637800 I 0.750
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I 0.750
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I 0.750
OPUNC01G24010 Oryza punctata OPUNC01G24010 I 0.750
ONIVA01G27030 Oryza nivara ONIVA01G27030 I 0.750
OMERI01G22060 Oryza meridionalis OMERI01G22060 I 0.750
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I 0.750
OBART01G24030 Oryza barthii OBART01G24030 I 0.750
BGIOSGA004072 Oryza indica BGIOSGA004072 I 0.750
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N 0.747