Pavir.Eb02926 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Eb02926 T289171_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb02926.1.p Myb 14 62
Pavir.Eb02926.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb03g033160 Sorghum bicolor Sb03g033160 N 0.896
OB01G38240 Oryza brachyantha OB01G38240 N 0.887
GRMZM2G167829 Zea mays GRMZM2G167829 N 0.875
Pavir.Ea02676 Panicum virgatum Pavir.Ea02676 N 0.875
OBART01G29250 Oryza barthii OBART01G29250 N 0.870
ORUFI01G32340 Oryza rufipogon ORUFI01G32340 N 0.870
OGLUM01G33320 Oryza glumaepatula OGLUM01G33320 N 0.870
OS01G0722300 Oryza sativa OS01G0722300 N 0.870
BGIOSGA004364 Oryza indica BGIOSGA004364 N 0.870
GRMZM2G151205 Zea mays GRMZM2G151205 N 0.866
ONIVA01G33470 Oryza nivara ONIVA01G33470 N 0.859
Si004558m.g Setaria italica Si004558m.g N 0.845
F775_22853 Aegilops tauschii F775_22853 N 0.825
TRAES3BF016200140CFD_g Triticum aestivum TRAES3BF016200140CFD_g N 0.807
TRIUR3_05615 Triticum urartu TRIUR3_05615 N 0.787
F775_22442 Aegilops tauschii F775_22442 N 0.787
Traes_3AL_7C031019E Triticum aestivum Traes_3AL_7C031019E N 0.773
TRIUR3_25771 Triticum urartu TRIUR3_25771 N 0.768
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.706
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I 0.700
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I 0.700
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I 0.691
Pavir.Ea00256 Panicum virgatum Pavir.Ea00256 N 0.689
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.688
TCM_037728 Theobroma cacao TCM_037728 I 0.688
Pavir.Eb00254 Panicum virgatum Pavir.Eb00254 N 0.686
Si002629m.g Setaria italica Si002629m.g N 0.686
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.685
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.683
F775_22184 Aegilops tauschii F775_22184 I 0.683
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.682
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.681
MTR_6g090405 Medicago truncatula MTR_6g090405 I 0.680
Si022874m.g Setaria italica Si022874m.g I 0.679
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.679
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I 0.670
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.667
mgf017404m Mimulus guttatus mgf017404m I 0.667
BGIOSGA004221 Oryza indica BGIOSGA004221 I 0.666
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.666
OBART01G26850 Oryza barthii OBART01G26850 I 0.666
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.666
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I 0.666
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I 0.666
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I 0.666
Sb03g003120 Sorghum bicolor Sb03g003120 N 0.665
MLOC_67874 Hordeum vulgare MLOC_67874 N 0.664
GRMZM2G001875 Zea mays GRMZM2G001875 N 0.662
Aquca_001_00195 Aquilegia coerulea Aquca_001_00195 I 0.662