Pavir.Fa00215 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Fa00215 T289175_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00215.1.p Myb 14 61
Pavir.Fa00215.1.p Myb 67 93

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29005.m000265 Ricinus communis 29005.m000265 N 0.757
LjSGA_050296.1 Lotus japonicus LjSGA_050296.1 N 0.744
evm.TU.supercontig_29.114 Carica papaya evm.TU.supercontig_29.114 N 0.723
mgf023707m Mimulus guttatus mgf023707m N 0.705
Si032487m.g Setaria italica Si032487m.g N 0.701
Sb07g024970 Sorghum bicolor Sb07g024970 I 0.689
Si015412m.g Setaria italica Si015412m.g I 0.689
Ca_14339 Cicer arietinum Ca_14339 N 0.688
Traes_6DL_D1B5EA05F Triticum aestivum Traes_6DL_D1B5EA05F N 0.684
Pavir.J36915 Panicum virgatum Pavir.J36915 I 0.677
GRMZM2G037650 Zea mays GRMZM2G037650 I 0.677
Pavir.Fb02321 Panicum virgatum Pavir.Fb02321 I 0.677
SELMODRAFT_39496 Selaginella moellendorffii SELMODRAFT_39496 N 0.675
SELMODRAFT_39499 Selaginella moellendorffii SELMODRAFT_39499 N 0.675
LjT29P04.60.nd Lotus japonicus LjT29P04.60.nd N 0.666
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.666