Pavir.Fa01260 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Fa01260 T289186_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa01260.1.p Myb 50 79

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_817.1 Carica papaya evm.TU.supercontig_817.1 N 0.840
PRUPE_ppa007491m2g Prunus persica PRUPE_ppa007491m2g N 0.840
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.819
orange1.1g038008m.g Citrus sinensis orange1.1g038008m.g N 0.763
BGIOSGA028509 Oryza indica BGIOSGA028509 N 0.763
OS08G0346400 Oryza sativa OS08G0346400 I 0.763
OPUNC08G10730 Oryza punctata OPUNC08G10730 N 0.763
OGLUM08G12590 Oryza glumaepatula OGLUM08G12590 I 0.763
F775_22357 Aegilops tauschii F775_22357 N 0.748
Pavir.Ba02286 Panicum virgatum Pavir.Ba02286 N 0.744
LjSGA_102149.2 Lotus japonicus LjSGA_102149.2 N 0.710
Cla005572 Citrullus lanatus Cla005572 N 0.710
PGSC0003DMG400009304 Solanum tuberosum PGSC0003DMG400009304 I 0.703
e_gw1.141.94.1 Physcomitrella patens e_gw1.141.94.1 N 0.695
Bra034737 Brassica rapa Bra034737 N 0.684
Carubv10004940m.g Capsella rubella Carubv10004940m.g I 0.675
MLOC_63597 Hordeum vulgare MLOC_63597 I 0.664