CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia00770
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ia00770
T289247_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia00770.1.p
Myb
194
244
RVQWPSELHHKFVEAVYQIGMDKAAPKKILEVMNVDGLSRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si007844m.g
Setaria italica
Si007844m.g
I
0.759
Pavir.J10177
Panicum virgatum
Pavir.J10177
N
0.747
Pavir.Db00757
Panicum virgatum
Pavir.Db00757
N
0.747
Sb08g006300
Sorghum bicolor
Sb08g006300
N
0.739
Sb10g024180
Sorghum bicolor
Sb10g024180
N
0.690
evm.TU.supercontig_2.187
Carica papaya
evm.TU.supercontig_2.187
I
0.673
Si008512m.g
Setaria italica
Si008512m.g
N
0.667