Pavir.Ia03027 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia03027 T289260_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03027.1.p Myb 317 367

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Ib02072 Panicum virgatum Pavir.Ib02072 N 0.829
Pavir.J38487 Panicum virgatum Pavir.J38487 N 0.715
Si038913m.g Setaria italica Si038913m.g N 0.715
Pavir.Ia04672 Panicum virgatum Pavir.Ia04672 N 0.715
GRMZM2G100431 Zea mays GRMZM2G100431 N 0.693
Bra016722 Brassica rapa Bra016722 N 0.691
Carubv10009267m.g Capsella rubella Carubv10009267m.g N 0.689
Ciclev10019841m.g Citrus clementina Ciclev10019841m.g N 0.685
Si035368m.g Setaria italica Si035368m.g N 0.680
Bra026876 Brassica rapa Bra026876 N 0.679
Sb01g032240 Sorghum bicolor Sb01g032240 N 0.678
30138.m004006 Ricinus communis 30138.m004006 N 0.676
BRADI4G40450 Brachypodium distachyon BRADI4G40450 N 0.674
Bo8g065710 Brassica oleracea Bo8g065710 N 0.673
Bra041096 Brassica rapa Bra041096 N 0.672
Bo7g081200 Brassica oleracea Bo7g081200 N 0.672
Thhalv10005386m.g Eutrema salsugineum Thhalv10005386m.g N 0.672
Pm015999 Prunus mume Pm015999 N 0.668
POPTR_0004s11750 Populus trichocarpa POPTR_0004s11750 N 0.661