Pavir.Ia03542 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia03542 T289263_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYBP_MAIZE
M11057_2.00
Zea mays
ACCWACCHN

NDGGTWGGT
Transfac
Matys et al.(2006)
P$P_01
0.766 0.928
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03542.1.p Myb 14 61
Pavir.Ia03542.1.p Myb 67 88

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I 0.000