Pavir.Ia03786 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia03786 T289265_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia03786.1.p Myb 5 33

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC01G25350 Oryza punctata OPUNC01G25350 N 0.814
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.750
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N 0.736
cassava45648.m1 Manihot esculenta cassava45648.m1 N 0.736
Pavir.J14839 Panicum virgatum Pavir.J14839 N 0.736
CM0385.220.nd Lotus japonicus CM0385.220.nd N 0.736
Bo4g198650 Brassica oleracea Bo4g198650 N 0.736
MTR_1g087540 Medicago truncatula MTR_1g087540 N 0.726
F775_20859 Aegilops tauschii F775_20859 N 0.719
PK00358.1 Cannabis sativa PK00358.1 N 0.718
AMTR_s00057p00069720 Amborella trichopoda AMTR_s00057p00069720 N 0.718
cassava15703.m1 Manihot esculenta cassava15703.m1 N 0.715
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N 0.709
TRIUR3_33467 Triticum urartu TRIUR3_33467 N 0.701
ATMYB16 Arabidopsis thaliana AT5G15310 I 0.699
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.699
OLONG_025203 Oryza longistaminata OLONG_025203 N 0.697
MDP0000793261 Malus domestica MDP0000793261 N 0.697
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N 0.697
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N 0.692
Traes_6AL_C0A2B4F041 Triticum aestivum Traes_6AL_C0A2B4F041 N 0.689
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N 0.687
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.685
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N 0.684
PDK_20s1546421g001 Phoenix dactylifera PDK_20s1546421g001 N 0.682
SapurV1A.1876s0010 Salix purpurea SapurV1A.1876s0010 N 0.678
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.678
PK22972.1 Cannabis sativa PK22972.1 N 0.678
evm.TU.supercontig_1.55 Carica papaya evm.TU.supercontig_1.55 N 0.677
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.674
AMTR_s00087p00039380 Amborella trichopoda AMTR_s00087p00039380 N 0.673
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N 0.672
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N 0.672
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.672
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N 0.672
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.670
Traes_3AL_F09C7CA19 Triticum aestivum Traes_3AL_F09C7CA19 N 0.670
Traes_3DL_D9A29948B Triticum aestivum Traes_3DL_D9A29948B N 0.670
MLOC_71332 Hordeum vulgare MLOC_71332 N 0.670
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N 0.669
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N 0.669
MDP0000413041 Malus domestica MDP0000413041 N 0.669
GLYMA16G16170 Glycine max GLYMA16G16170 N 0.668
mgf023771m Mimulus guttatus mgf023771m N 0.666
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.666
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N 0.665
OS08G0548000 Oryza sativa OS08G0548000 N 0.662
MDP0000825447 Malus domestica MDP0000825447 N 0.662
30147.m014198 Ricinus communis 30147.m014198 N 0.662
OLONG_020951 Oryza longistaminata OLONG_020951 N 0.661