Pavir.Ia04672 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia04672 T289271_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04672.1.p Myb 284 334

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si038913m.g Setaria italica Si038913m.g N 0.909
Pavir.J38487 Panicum virgatum Pavir.J38487 N 0.909
GRMZM2G100431 Zea mays GRMZM2G100431 N 0.888
BRADI4G40450 Brachypodium distachyon BRADI4G40450 N 0.864
Sb01g043100 Sorghum bicolor Sb01g043100 N 0.849
GSMUA_Achr1G24520_001 Musa acuminata GSMUA_Achr1G24520_001 N 0.758
Traes_5DS_ED5D9E7C8 Triticum aestivum Traes_5DS_ED5D9E7C8 N 0.758
F775_32528 Aegilops tauschii F775_32528 N 0.758
MLOC_21002 Hordeum vulgare MLOC_21002 N 0.749
GSMUA_Achr6G24610_001 Musa acuminata GSMUA_Achr6G24610_001 N 0.749
TRIUR3_27708 Triticum urartu TRIUR3_27708 N 0.748
Traes_5AS_C458D04EB Triticum aestivum Traes_5AS_C458D04EB N 0.748
Traes_1BS_2D464CB3E Triticum aestivum Traes_1BS_2D464CB3E N 0.748
Traes_6DL_95CDF7628 Triticum aestivum Traes_6DL_95CDF7628 N 0.748
Cagra.3501s0113 Capsella grandiflora Cagra.3501s0113 N 0.730
Traes_5BS_199E47242 Triticum aestivum Traes_5BS_199E47242 N 0.727
Pavir.Ia03027 Panicum virgatum Pavir.Ia03027 N 0.715
Pavir.Ib02072 Panicum virgatum Pavir.Ib02072 N 0.697
GSMUA_Achr6G23940_001 Musa acuminata GSMUA_Achr6G23940_001 N 0.692
PK21343.1 Cannabis sativa PK21343.1 N 0.688
OS03G0425800 Oryza sativa OS03G0425800 N 0.676
OB03G31070 Oryza brachyantha OB03G31070 N 0.676
OBART03G22020 Oryza barthii OBART03G22020 N 0.676
OMERI03G19860 Oryza meridionalis OMERI03G19860 N 0.676
OLONG_010547 Oryza longistaminata OLONG_010547 N 0.676
OGLUM03G22800 Oryza glumaepatula OGLUM03G22800 N 0.676
ONIVA03G23870 Oryza nivara ONIVA03G23870 N 0.676
ORUFI03G22740 Oryza rufipogon ORUFI03G22740 N 0.676
OPUNC03G20760 Oryza punctata OPUNC03G20760 N 0.676
ORGLA03G0204400 Oryza glaberrima ORGLA03G0204400 N 0.676
BGIOSGA012915 Oryza indica BGIOSGA012915 N 0.676
Aquca_026_00151 Aquilegia coerulea Aquca_026_00151 N 0.675
VIT_14s0108g01580 Vitis vinifera VIT_14s0108g01580 N 0.674
cassava22481.valid.m1 Manihot esculenta cassava22481.valid.m1 N 0.672
Si035368m.g Setaria italica Si035368m.g N 0.665