Pavir.J00200 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J00200 T289297_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00200.1.p Myb 22 69

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J00201 Panicum virgatum Pavir.J00201 N 0.768
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.763
Pavir.Ca01212 Panicum virgatum Pavir.Ca01212 N 0.728
BGIOSGA021814 Oryza indica BGIOSGA021814 N 0.723
GRMZM2G402156 Zea mays GRMZM2G402156 N 0.718
Sb10g006570 Sorghum bicolor Sb10g006570 I 0.688
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N 0.683
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.683
F775_24973 Aegilops tauschii F775_24973 N 0.682
F775_03070 Aegilops tauschii F775_03070 I 0.682
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.681
F775_23301 Aegilops tauschii F775_23301 N 0.678
MLOC_51337 Hordeum vulgare MLOC_51337 N 0.678
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.678
TRIUR3_33433 Triticum urartu TRIUR3_33433 N 0.678
TRIUR3_31433 Triticum urartu TRIUR3_31433 N 0.678
F775_23426 Aegilops tauschii F775_23426 N 0.678
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.669
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.664