Pavir.J00203 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J00203 T289299_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00203.1.p Myb 140 186

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N 0.857
Sb10g006570 Sorghum bicolor Sb10g006570 I 0.770
F775_03070 Aegilops tauschii F775_03070 I 0.762
BGIOSGA021814 Oryza indica BGIOSGA021814 N 0.760
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.754
F775_23426 Aegilops tauschii F775_23426 N 0.750
TRIUR3_33433 Triticum urartu TRIUR3_33433 N 0.750
F775_23301 Aegilops tauschii F775_23301 N 0.750
TRIUR3_31433 Triticum urartu TRIUR3_31433 N 0.750
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.744
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.723
Sb10g009580 Sorghum bicolor Sb10g009580 I 0.715
F775_00072 Aegilops tauschii F775_00072 N 0.710
Traes_7AS_6A126F5F5 Triticum aestivum Traes_7AS_6A126F5F5 N 0.710
MLOC_51337 Hordeum vulgare MLOC_51337 N 0.709
OB06G14480 Oryza brachyantha OB06G14480 N 0.709
F775_23221 Aegilops tauschii F775_23221 N 0.697
Traes_1AL_FF8F7A939 Triticum aestivum Traes_1AL_FF8F7A939 N 0.697
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.691
F775_24973 Aegilops tauschii F775_24973 N 0.686
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.684
Si032172m.g Setaria italica Si032172m.g I 0.683
Pavir.J00200 Panicum virgatum Pavir.J00200 N 0.683
LPERR10G06560 Leersia perrieri LPERR10G06560 N 0.677
Pavir.J00201 Panicum virgatum Pavir.J00201 N 0.675
MLOC_10707 Hordeum vulgare MLOC_10707 N 0.675
Pavir.J01189 Panicum virgatum Pavir.J01189 I 0.674
LPERR06G04400 Leersia perrieri LPERR06G04400 N 0.674
Pavir.Ca01212 Panicum virgatum Pavir.Ca01212 N 0.673
Si032599m.g Setaria italica Si032599m.g I 0.670
Sb10g005020 Sorghum bicolor Sb10g005020 I 0.670
Pavir.Da02101 Panicum virgatum Pavir.Da02101 I 0.666
Si007889m.g Setaria italica Si007889m.g I 0.666
LPERR06G04380 Leersia perrieri LPERR06G04380 N 0.665
ORGLA06G0044500 Oryza glaberrima ORGLA06G0044500 N 0.664
OGLUM06G05040 Oryza glumaepatula OGLUM06G05040 N 0.664
BGIOSGA021812 Oryza indica BGIOSGA021812 N 0.664
BGIOSGA021811 Oryza indica BGIOSGA021811 N 0.664
ONIVA06G15060 Oryza nivara ONIVA06G15060 N 0.664
ONIVA06G15070 Oryza nivara ONIVA06G15070 N 0.664
ORUFI06G04920 Oryza rufipogon ORUFI06G04920 N 0.664
BGIOSGA021810 Oryza indica BGIOSGA021810 N 0.663
ORGLA06G0044900 Oryza glaberrima ORGLA06G0044900 N 0.663
OPUNC06G04630 Oryza punctata OPUNC06G04630 N 0.662