Pavir.J06465 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J06465 T289337_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.744 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06465.1.p Myb 35 85
Pavir.J06465.2.p Myb 35 85

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action