Pavir.J12412 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J12412 T289370_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J12412.1.p Myb 31 76

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G415077 Zea mays GRMZM2G415077 N 0.742
GRMZM2G115070 Zea mays GRMZM2G115070 I 0.711
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.699
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.699
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.699
OBART05G04370 Oryza barthii OBART05G04370 I 0.699
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.699
OS05G0162800 Oryza sativa OS05G0162800 I 0.699
Si038786m.g Setaria italica Si038786m.g I 0.693
Sb01g012460 Sorghum bicolor Sb01g012460 I 0.693
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.690
Cla018914 Citrullus lanatus Cla018914 I 0.682
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.682
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.682
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.682
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.682
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.682
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.682
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.682
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.680
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.672
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.672
Si017289m.g Setaria italica Si017289m.g I 0.672
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.672
F775_18043 Aegilops tauschii F775_18043 I 0.672
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.672
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.672
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.672
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.672
OB06G35920 Oryza brachyantha OB06G35920 I 0.672
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.672
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.672
OB02G35470 Oryza brachyantha OB02G35470 I 0.672
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I 0.670
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I 0.670
OBART05G04360 Oryza barthii OBART05G04360 I 0.665
OB05G14050 Oryza brachyantha OB05G14050 I 0.665