Pavir.J13527 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J13527 T289373_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J13527.1.p Myb 5 57
Pavir.J13527.2.p Myb 5 57

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N 0.909
Pavir.J17249 Panicum virgatum Pavir.J17249 N 0.909
Si002375m.g Setaria italica Si002375m.g N 0.909
Sb03g005080 Sorghum bicolor Sb03g005080 N 0.849
GRMZM2G163291 Zea mays GRMZM2G163291 N 0.849
mgf004823m Mimulus guttatus mgf004823m I 0.749
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.746
MLOC_34636 Hordeum vulgare MLOC_34636 N 0.732
Ca_08043 Cicer arietinum Ca_08043 I 0.729
Si036471m.g Setaria italica Si036471m.g N 0.723
Sb01g013670 Sorghum bicolor Sb01g013670 N 0.723
GRMZM2G095239 Zea mays GRMZM2G095239 N 0.723
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N 0.723
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N 0.723
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.719
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.719
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.716
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.716
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.677
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.677
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.677
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.668
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.668