Pavir.J13941 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J13941 T289375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J13941.1.p Myb 53 99
Pavir.J13941.1.p Myb 107 152

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA004824 Oryza indica BGIOSGA004824 N 0.666
OPUNC07G08180 Oryza punctata OPUNC07G08180 N 0.676
ORGLA01G0315200 Oryza glaberrima ORGLA01G0315200 N 0.666
ORUFI01G41050 Oryza rufipogon ORUFI01G41050 N 0.666
ORUFI07G08780 Oryza rufipogon ORUFI07G08780 N 0.674
OS01G0855400 Oryza sativa OS01G0855400 N 0.666
Sb01g013830 Sorghum bicolor Sb01g013830 N 0.682
Si039882m.g Setaria italica Si039882m.g N 0.718
Traes_3AL_152A7186A Triticum aestivum Traes_3AL_152A7186A N 0.671
OPUNC01G36560 Oryza punctata OPUNC01G36560 N 0.681
ONIVA07G07540 Oryza nivara ONIVA07G07540 N 0.674
BGIOSGA024590 Oryza indica BGIOSGA024590 N 0.663
BGIOSGA025449 Oryza indica BGIOSGA025449 N 0.674
GRMZM2G121570 Zea mays GRMZM2G121570 N 0.682
OBART01G37720 Oryza barthii OBART01G37720 N 0.666
OLONG_012136 Oryza longistaminata OLONG_012136 N 0.666
OLONG_023640 Oryza longistaminata OLONG_023640 N 0.663
OMERI07G07070 Oryza meridionalis OMERI07G07070 N 0.676
ONIVA01G42540 Oryza nivara ONIVA01G42540 N 0.666
Pavir.Ib04086 Panicum virgatum Pavir.Ib04086 N 0.770