Pavir.J20053 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J20053 T289403_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J20053.1.p Myb 390 435
Pavir.J20053.2.p Myb 303 348
Pavir.J20053.3.p Myb 390 435
Pavir.J20053.4.p Myb 390 435
Pavir.J20053.5.p Myb 390 435

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J00694 Panicum virgatum Pavir.J00694 N 0.891
Sb09g021520 Sorghum bicolor Sb09g021520 N 0.794
Si021654m.g Setaria italica Si021654m.g N 0.787
MLOC_77437 Hordeum vulgare MLOC_77437 N 0.696
GRMZM5G884544 Zea mays GRMZM5G884544 N 0.686
GRMZM2G096759 Zea mays GRMZM2G096759 N 0.679
Pavir.Da01516 Panicum virgatum Pavir.Da01516 N 0.676
TRIUR3_11795 Triticum urartu TRIUR3_11795 N 0.672
F775_12196 Aegilops tauschii F775_12196 N 0.672
Traes_7DL_2B62A6D74 Triticum aestivum Traes_7DL_2B62A6D74 N 0.672
Traes_7AL_ED205638C Triticum aestivum Traes_7AL_ED205638C N 0.672
OLONG_021595 Oryza longistaminata OLONG_021595 N 0.669
Sb09g030300 Sorghum bicolor Sb09g030300 N 0.664