Pavir.J22834 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J22834 T289412_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J22834.1.p Myb 14 61
Pavir.J22834.1.p Myb 67 94

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIUR3_28515 Triticum urartu TRIUR3_28515 N 0.757
F775_04823 Aegilops tauschii F775_04823 I 0.750
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.739
GRMZM2G124715 Zea mays GRMZM2G124715 I 0.729
mgf021550m Mimulus guttatus mgf021550m N 0.728
GRMZM2G077789 Zea mays GRMZM2G077789 I 0.728
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.721
PRUPE_ppa021145mg Prunus persica PRUPE_ppa021145mg N 0.720
MLOC_69570 Hordeum vulgare MLOC_69570 I 0.719
TRIUR3_23036 Triticum urartu TRIUR3_23036 N 0.715
30225.m001697 Ricinus communis 30225.m001697 N 0.704
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.704
OB05G25260 Oryza brachyantha OB05G25260 N 0.696
29889.m003258 Ricinus communis 29889.m003258 I 0.689
MDP0000582174 Malus domestica MDP0000582174 N 0.686
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N 0.675
29816.m000664 Ricinus communis 29816.m000664 N 0.666
SELMODRAFT_39454 Selaginella moellendorffii SELMODRAFT_39454 I 0.661
SELMODRAFT_39481 Selaginella moellendorffii SELMODRAFT_39481 I 0.661