Pavir.J33560 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J33560 T289453_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.748 0.828
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J33560.1.p Myb 10 57
Pavir.J33560.1.p Myb 63 108
Pavir.J33560.2.p Myb 1 43

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

Invalid Input OrderBy

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action