SapurV1A.0120s0010 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0120s0010 T289599_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.778 0.817
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.778 0.817
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.770 0.806
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.674 0.731
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.672 0.753
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.661 0.677
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.661 0.677
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.661 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0120s0010.1.p Myb 13 60
SapurV1A.0120s0010.1.p Myb 66 111

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

701 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action