SapurV1A.0200s0020 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0200s0020 T289640_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB124
M01267_2.00 		Arabidopsis thaliana
NNVCGCKCBN
NVGMGCGBNN		 PBM
Lambert et al.(2019)
pTH11556 		0.808 0.868
MYB88
M07042_2.00 		Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN		 Dap-seq
OMalley et al.(2016)
MYB88_col_a 		0.780 0.857
MYB88
M07043_2.00 		Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN		 Dap-seq
OMalley et al.(2016)
MYB88_colamp_a 		0.780 0.857
MYB88
M11038_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB88_01 		0.780 0.857
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0200s0020.1.p Myb 27 72
SapurV1A.0200s0020.1.p Myb 78 122
SapurV1A.0200s0020.2.p Myb 27 72
SapurV1A.0200s0020.2.p Myb 78 122
SapurV1A.0200s0020.3.p Myb 27 72
SapurV1A.0200s0020.3.p Myb 78 122

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0008s14790 Populus trichocarpa POPTR_0008s14790 I 0.909
Cucsa.285270 Cucumis sativus Cucsa.285270 I 0.882
Cla010333 Citrullus lanatus Cla010333 I 0.882
PK05123.1 Cannabis sativa PK05123.1 I 0.879
POPTR_0010s10310 Populus trichocarpa POPTR_0010s10310 I 0.870
cassava39089.m1 Manihot esculenta cassava39089.m1 I 0.870
cassava35260.valid.m1 Manihot esculenta cassava35260.valid.m1 I 0.870
GLYMA01G05190 Glycine max GLYMA01G05190 I 0.870
MTR_5g038910 Medicago truncatula MTR_5g038910 I 0.870
Ca_18779 Cicer arietinum Ca_18779 I 0.870
GLYMA02G02310 Glycine max GLYMA02G02310 I 0.870
SapurV1A.0062s0030 Salix purpurea SapurV1A.0062s0030 I 0.870
MDP0000165523 Malus domestica MDP0000165523 I 0.870
29736.m002013 Ricinus communis 29736.m002013 I 0.868
Ciclev10031405m.g Citrus clementina Ciclev10031405m.g I 0.863
orange1.1g044977m.g Citrus sinensis orange1.1g044977m.g I 0.863
evm.TU.supercontig_183.27 Carica papaya evm.TU.supercontig_183.27 I 0.862
PRUPE_ppa017536mg Prunus persica PRUPE_ppa017536mg I 0.862
Pm006532 Prunus mume Pm006532 I 0.862
Gorai.005G139500 Gossypium raimondii Gorai.005G139500 I 0.862
MTR_8g468380 Medicago truncatula MTR_8g468380 I 0.860
VIT_01s0026g01910 Vitis vinifera VIT_01s0026g01910 I 0.854
MDP0000210970 Malus domestica MDP0000210970 I 0.854
Eucgr.B03417 Eucalyptus grandis Eucgr.B03417 I 0.852
TCM_011776 Theobroma cacao TCM_011776 I 0.840
Gorai.013G083300 Gossypium raimondii Gorai.013G083300 I 0.836
GLYMA18G16040 Glycine max GLYMA18G16040 I 0.831
Aquca_002_00543 Aquilegia coerulea Aquca_002_00543 I 0.824
GLYMA08G40950 Glycine max GLYMA08G40950 I 0.823
PGSC0003DMG400025612 Solanum tuberosum PGSC0003DMG400025612 I 0.817
Solyc05g007160.2 Solanum lycopersicum Solyc05g007160.2 I 0.817
MYB124 Arabidopsis thaliana AT1G14350 D 0.808
Lus10012847.g Linum usitatissimum Lus10012847.g I 0.804
Lus10030494.g Linum usitatissimum Lus10030494.g I 0.804
Thhalv10004109m.g Eutrema salsugineum Thhalv10004109m.g I 0.797
Eucgr.G02522 Eucalyptus grandis Eucgr.G02522 I 0.796
Carubv10011707m.g Capsella rubella Carubv10011707m.g I 0.792
Cagra.3501s0066 Capsella grandiflora Cagra.3501s0066 I 0.792
Bostr.13671s0016 Boechera stricta Bostr.13671s0016 I 0.792
Bra019658 Brassica rapa Bra019658 I 0.791
Bo5g019500 Brassica oleracea Bo5g019500 I 0.791
Thhalv10007659m.g Eutrema salsugineum Thhalv10007659m.g I 0.791
Bo2g136560 Brassica oleracea Bo2g136560 I 0.789
mgf009409m Mimulus guttatus mgf009409m I 0.784
FLP Arabidopsis lyrata fgenesh2_kg.1__1561__AT1G14350.1 I 0.783
Bra024804 Brassica rapa Bra024804 I 0.780
Bo7g080730 Brassica oleracea Bo7g080730 I 0.780
Bostr.0556s0099 Boechera stricta Bostr.0556s0099 I 0.780
MYB88 Arabidopsis thaliana AT2G02820 D 0.780
MYB88 Arabidopsis lyrata fgenesh2_kg.5__181__AT2G02820.2 I 0.780
Carubv10017119m.g Capsella rubella Carubv10017119m.g I 0.759
Cagra.0534s0022 Capsella grandiflora Cagra.0534s0022 I 0.759
GSMUA_Achr10G18880_001 Musa acuminata GSMUA_Achr10G18880_001 I 0.739
Solyc04g005710.1 Solanum lycopersicum Solyc04g005710.1 I 0.739
Pavir.Bb03405 Panicum virgatum Pavir.Bb03405 I 0.723
PGSC0003DMG400002828 Solanum tuberosum PGSC0003DMG400002828 I 0.722
PGSC0003DMG400026758 Solanum tuberosum PGSC0003DMG400026758 I 0.722
AMTR_s00010p00252990 Amborella trichopoda AMTR_s00010p00252990 I 0.722
OS07G0627300 Oryza sativa OS07G0627300 I 0.704
ORUFI07G24080 Oryza rufipogon ORUFI07G24080 I 0.704
OBART07G22930 Oryza barthii OBART07G22930 I 0.704
BGIOSGA026188 Oryza indica BGIOSGA026188 I 0.704
OGLUM07G22980 Oryza glumaepatula OGLUM07G22980 I 0.704
ORGLA07G0179200 Oryza glaberrima ORGLA07G0179200 I 0.704
PDK_20s1473891g001 Phoenix dactylifera PDK_20s1473891g001 I 0.700
OB07G28520 Oryza brachyantha OB07G28520 I 0.699
Traes_2DS_9430AAD52 Triticum aestivum Traes_2DS_9430AAD52 I 0.694
Traes_2AS_1161E1D2E Triticum aestivum Traes_2AS_1161E1D2E I 0.694
Traes_2BS_F1B450FA4 Triticum aestivum Traes_2BS_F1B450FA4 I 0.694
OPUNC07G21540 Oryza punctata OPUNC07G21540 I 0.694
Si029124m.g Setaria italica Si029124m.g I 0.693
Sb02g040050 Sorghum bicolor Sb02g040050 I 0.685
GRMZM2G064630 Zea mays GRMZM2G064630 I 0.685
Pavir.J36475 Panicum virgatum Pavir.J36475 I 0.684
GSMUA_Achr6G10650_001 Musa acuminata GSMUA_Achr6G10650_001 I 0.682