SapurV1A.0234s0050 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0234s0050 T289655_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.734 0.846
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.734 0.846
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.734 0.846
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0234s0050.1.p Myb 122 167
SapurV1A.0234s0050.2.p Myb 122 167
SapurV1A.0234s0050.3.p Myb 122 167
SapurV1A.0234s0050.4.p Myb 122 167
SapurV1A.0234s0050.5.p Myb 122 167
SapurV1A.0234s0050.6.p Myb 122 167
SapurV1A.0234s0050.7.p Myb 122 167
SapurV1A.0234s0050.8.p Myb 122 167

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action