SapurV1A.0333s0040 (Salix purpurea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 SapurV1A.0333s0040 T289692_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SRM1
M02307_2.00
Arabidopsis thaliana
NNHNATCNN

NNGATNDNN
PBM
Weirauch et al.(2014)
pTH7080
0.681 0.815
SRM1
M07121_2.00
Arabidopsis thaliana
YCTTATCYWHW

WDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a
0.681 0.815
SRM1
M07122_2.00
Arabidopsis thaliana
YCTTATCYWHWWH

DWWDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_col_b
0.681 0.815
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0333s0040.1.p Myb 9 58
SapurV1A.0333s0040.1.p Myb 122 167
SapurV1A.0333s0040.2.p Myb 9 58
SapurV1A.0333s0040.2.p Myb 122 167
SapurV1A.0333s0040.3.p Myb 9 58
SapurV1A.0333s0040.3.p Myb 122 167
SapurV1A.0333s0040.4.p Myb 9 58
SapurV1A.0333s0040.4.p Myb 122 167
SapurV1A.0333s0040.5.p Myb 9 58
SapurV1A.0333s0040.5.p Myb 122 167
SapurV1A.0333s0040.6.p Myb 9 58
SapurV1A.0333s0040.6.p Myb 122 167

Links

Other Myb/SANT family TFs
Other Salix purpurea TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa009396mg Prunus persica PRUPE_ppa009396mg I 0.850
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.830
GLYMA07G28310 Glycine max GLYMA07G28310 I 0.830
SapurV1A.0234s0050 Salix purpurea SapurV1A.0234s0050 I 0.822
GSMUA_Achr10G06880_001 Musa acuminata GSMUA_Achr10G06880_001 N 0.822
cassava18614.valid.m1 Manihot esculenta cassava18614.valid.m1 I 0.812
Pm006046 Prunus mume Pm006046 I 0.812
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.812
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.811
30131.m007263 Ricinus communis 30131.m007263 I 0.806
Cucsa.013870 Cucumis sativus Cucsa.013870 I 0.805
Cla009230 Citrullus lanatus Cla009230 I 0.805
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.803
Eucgr.J00349 Eucalyptus grandis Eucgr.J00349 N 0.802
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.796
Gorai.005G212900 Gossypium raimondii Gorai.005G212900 I 0.796
TCM_007672 Theobroma cacao TCM_007672 I 0.796
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.792
Gorai.013G067600 Gossypium raimondii Gorai.013G067600 I 0.787
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.775
GSMUA_Achr9G23760_001 Musa acuminata GSMUA_Achr9G23760_001 I 0.773
GLYMA18G18140 Glycine max GLYMA18G18140 I 0.770
GLYMA08G40020 Glycine max GLYMA08G40020 I 0.770
Eucgr.G02591 Eucalyptus grandis Eucgr.G02591 I 0.769
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.765
PK13672.1 Cannabis sativa PK13672.1 I 0.764
orange1.1g022439m.g Citrus sinensis orange1.1g022439m.g I 0.758
Ciclev10032259m.g Citrus clementina Ciclev10032259m.g I 0.758
Gorai.012G135600 Gossypium raimondii Gorai.012G135600 I 0.757
Cla020348 Citrullus lanatus Cla020348 I 0.747
Ca_19000 Cicer arietinum Ca_19000 I 0.739
Lus10013447.g Linum usitatissimum Lus10013447.g I 0.734
mgf009460m Mimulus guttatus mgf009460m I 0.722
Lus10041001.g Linum usitatissimum Lus10041001.g N 0.720
gene00786-v1.0-hybrid Fragaria vesca gene00786-v1.0-hybrid N 0.714
PGSC0003DMG400025303 Solanum tuberosum PGSC0003DMG400025303 I 0.713
OB04G36550 Oryza brachyantha OB04G36550 N 0.705
Pavir.Gb00055 Panicum virgatum Pavir.Gb00055 N 0.698
GSMUA_Achr9G21870_001 Musa acuminata GSMUA_Achr9G21870_001 N 0.694
Si022762m.g Setaria italica Si022762m.g N 0.692
Pavir.Ga00233 Panicum virgatum Pavir.Ga00233 N 0.687
fgenesh2_kg.6__825__AT5G08520.1 Arabidopsis lyrata fgenesh2_kg.6__825__AT5G08520.1 I 0.681
Carubv10001525m.g Capsella rubella Carubv10001525m.g I 0.681
Bo9g174380 Brassica oleracea Bo9g174380 I 0.681
SRM1 Arabidopsis thaliana AT5G08520 D 0.681
Thhalv10014203m.g Eutrema salsugineum Thhalv10014203m.g I 0.681
Cagra.1365s0066 Capsella grandiflora Cagra.1365s0066 I 0.681
Solyc04g008870.2 Solanum lycopersicum Solyc04g008870.2 N 0.678
BRADI5G26110 Brachypodium distachyon BRADI5G26110 N 0.671
30174.m008717 Ricinus communis 30174.m008717 I 0.669
Bostr.13129s0103 Boechera stricta Bostr.13129s0103 I 0.669
Bo3g004970 Brassica oleracea Bo3g004970 I 0.668
Bo2g009130 Brassica oleracea Bo2g009130 I 0.668
Sb06g032880 Sorghum bicolor Sb06g032880 N 0.663
GRMZM2G149958 Zea mays GRMZM2G149958 I 0.663
BGIOSGA014092 Oryza indica BGIOSGA014092 N 0.661
OMERI04G25000 Oryza meridionalis OMERI04G25000 N 0.661
OBART04G29570 Oryza barthii OBART04G29570 N 0.661
ORGLA04G0258700 Oryza glaberrima ORGLA04G0258700 N 0.661
OS04G0676700 Oryza sativa OS04G0676700 N 0.661
ORUFI04G31270 Oryza rufipogon ORUFI04G31270 N 0.661
OPUNC04G27130 Oryza punctata OPUNC04G27130 N 0.661
ONIVA04G28100 Oryza nivara ONIVA04G28100 N 0.661