CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0392s0110
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.0392s0110
T289710_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RVE1
M00879_2.00
Arabidopsis thaliana
AAATATCT
AGATATTT
PBM
Franco-Zorrilla et al.(2014)
RVE1
0.703
0.857
RVE1
M07128_2.00
Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN
Dap-seq
OMalley et al.(2016)
RVE1_col_a
0.703
0.857
RVE1
M07129_2.00
Arabidopsis thaliana
NNWAATATCW
WGATATTWNN
Dap-seq
OMalley et al.(2016)
RVE1_colamp_a
0.703
0.857
PK08316.1
M02350_2.00
Cannabis sativa
NNNRWATCNN
NNGATWYNNN
PBM
Weirauch et al.(2014)
pTH9488
0.690
0.833
OS08G0157600
M02330_2.00
Oryza sativa
DNRTATCHN
NDGATAYNH
PBM
Weirauch et al.(2014)
pTH7793
0.674
0.833
LHY
M06997_2.00
Arabidopsis thaliana
NWAAATATCT
AGATATTTWN
Dap-seq
OMalley et al.(2016)
LHY1_col_a
0.664
0.786
LHY
M06998_2.00
Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN
Dap-seq
OMalley et al.(2016)
LHY1_colamp_a
0.664
0.786
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0392s0110.1.p
Myb
704
745
RERWTEEEHKKFLEALKLYGRAWRRIEEHVGTKTAAQIRSQN
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
162 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy