CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.1671s0040
(
Salix purpurea
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
SapurV1A.1671s0040
T289863_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G04760
M02304_2.00
Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN
PBM
Weirauch et al.(2014)
pTH7079
0.685
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1671s0040.1.p
Myb
6
54
SSWSRQEDKLFEQALVLFPEETPNRWEKISSYVPGKSWREVRKHYEDLV
SapurV1A.1671s0040.1.p
Myb
103
150
GTPWTEEEHRLFLIGLQKYGKGDWRSISRNAVVSRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Salix purpurea
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0450s0110
Salix purpurea
SapurV1A.0450s0110
I
0.884
VIT_06s0080g00790
Vitis vinifera
VIT_06s0080g00790
I
0.756
TCM_041362
Theobroma cacao
TCM_041362
N
0.753
GLYMA20G24600
Glycine max
GLYMA20G24600
I
0.746
Ca_05454
Cicer arietinum
Ca_05454
I
0.746
GLYMA10G42450
Glycine max
GLYMA10G42450
I
0.746
Ciclev10016071m.g
Citrus clementina
Ciclev10016071m.g
I
0.740
MTR_1g111830
Medicago truncatula
MTR_1g111830
I
0.736
Aquca_072_00078
Aquilegia coerulea
Aquca_072_00078
N
0.733
30055.m001589
Ricinus communis
30055.m001589
I
0.729
cassava42566.valid.m1
Manihot esculenta
cassava42566.valid.m1
N
0.724
Ciclev10029205m.g
Citrus clementina
Ciclev10029205m.g
N
0.724
orange1.1g026855m.g
Citrus sinensis
orange1.1g026855m.g
N
0.724
PRUPE_ppa010926mg
Prunus persica
PRUPE_ppa010926mg
I
0.718
Pm017050
Prunus mume
Pm017050
I
0.718
Solyc05g055240.2
Solanum lycopersicum
Solyc05g055240.2
N
0.703
PGSC0003DMG400023495
Solanum tuberosum
PGSC0003DMG400023495
N
0.703
TCM_041160
Theobroma cacao
TCM_041160
I
0.702
Cucsa.280970
Cucumis sativus
Cucsa.280970
I
0.701
MDP0000289018
Malus domestica
MDP0000289018
I
0.701
Cla013899
Citrullus lanatus
Cla013899
N
0.697
GSMUA_Achr9G20620_001
Musa acuminata
GSMUA_Achr9G20620_001
I
0.695
gene23544-v1.0-hybrid
Fragaria vesca
gene23544-v1.0-hybrid
I
0.688
Pavir.Ga00233
Panicum virgatum
Pavir.Ga00233
N
0.688
Bo3g002960
Brassica oleracea
Bo3g002960
I
0.685
Bra009432
Brassica rapa
Bra009432
I
0.685
Bostr.13129s0486
Boechera stricta
Bostr.13129s0486
I
0.685
AT5G04760
Arabidopsis thaliana
AT5G04760
D
0.685
scaffold_600421.1
Arabidopsis lyrata
scaffold_600421.1
I
0.685
Bo9g178980
Brassica oleracea
Bo9g178980
I
0.685
Bra005818
Brassica rapa
Bra005818
I
0.685
Carubv10003623m.g
Capsella rubella
Carubv10003623m.g
I
0.685
Cagra.5249s0014
Capsella grandiflora
Cagra.5249s0014
I
0.685
VIT_10s0071g00660
Vitis vinifera
VIT_10s0071g00660
I
0.684
Gorai.006G113100
Gossypium raimondii
Gorai.006G113100
N
0.678
Pavir.Gb00055
Panicum virgatum
Pavir.Gb00055
N
0.677
AMTR_s00106p00065610
Amborella trichopoda
AMTR_s00106p00065610
N
0.676
Cucsa.364590
Cucumis sativus
Cucsa.364590
N
0.675
SapurV1A.0234s0050
Salix purpurea
SapurV1A.0234s0050
I
0.674
GSMUA_Achr11G09110_001
Musa acuminata
GSMUA_Achr11G09110_001
N
0.673
Thhalv10014613m.g
Eutrema salsugineum
Thhalv10014613m.g
I
0.672
Cla014242
Citrullus lanatus
Cla014242
N
0.672
GSMUA_Achr9G23760_001
Musa acuminata
GSMUA_Achr9G23760_001
I
0.671
Si022762m.g
Setaria italica
Si022762m.g
N
0.670
Gorai.006G118200
Gossypium raimondii
Gorai.006G118200
I
0.670
MDP0000610242
Malus domestica
MDP0000610242
N
0.669
Aquca_004_00257
Aquilegia coerulea
Aquca_004_00257
N
0.666
gw1.13.182.1
Physcomitrella patens
gw1.13.182.1
N
0.665
GSMUA_Achr1G17730_001
Musa acuminata
GSMUA_Achr1G17730_001
I
0.665
Aquca_035_00057
Aquilegia coerulea
Aquca_035_00057
I
0.665
Eucgr.G02591
Eucalyptus grandis
Eucgr.G02591
I
0.665
TCM_007672
Theobroma cacao
TCM_007672
I
0.664
Cucsa.103200
Cucumis sativus
Cucsa.103200
N
0.664
mgf022442m
Mimulus guttatus
mgf022442m
I
0.663
GLYMA07G28310
Glycine max
GLYMA07G28310
I
0.663
GLYMA20G01450
Glycine max
GLYMA20G01450
I
0.663
30131.m007263
Ricinus communis
30131.m007263
I
0.663
e_gw1.256.18.1
Physcomitrella patens
e_gw1.256.18.1
N
0.661