Thhalv10000498m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10000498m.g T289921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G24120
M00729_2.00
Arabidopsis thaliana
NNKATDCBNN

NNVGHATMNN
PBM
Chang et al.(2013)
pTH7086
0.679 0.660
AT3G24120
M07085_2.00
Arabidopsis thaliana
HAKATTCB

VGAATMTD
Dap-seq
OMalley et al.(2016)
At3g24120_col_a
0.679 0.660
AT3G24120
M07086_2.00
Arabidopsis thaliana
NDRAAKATTCBHHN

NDDVGAATMTTYHN
Dap-seq
OMalley et al.(2016)
At3g24120_colamp_a
0.679 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10000498m Myb 51 102

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G24120 Arabidopsis thaliana AT3G24120 D 0.679
SELMODRAFT_447259 Selaginella moellendorffii SELMODRAFT_447259 I 0.670
Si030441m.g Setaria italica Si030441m.g I 0.662
Solyc09g091880.2 Solanum lycopersicum Solyc09g091880.2 I 0.686
TCM_002071 Theobroma cacao TCM_002071 I 0.663
Traes_5BL_A28533902 Triticum aestivum Traes_5BL_A28533902 I 0.662
Traes_5DL_156E53683 Triticum aestivum Traes_5DL_156E53683 I 0.662
VIT_03s0017g02280 Vitis vinifera VIT_03s0017g02280 I 0.679
Ca_19147 Cicer arietinum Ca_19147 I 0.673
estExt_fgenesh1_pg.C_90140 Physcomitrella patens estExt_fgenesh1_pg.C_90140 I 0.666
mgf014157m Mimulus guttatus mgf014157m I 0.662
Eucgr.A02082 Eucalyptus grandis Eucgr.A02082 I 0.673
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.662
Lus10007132.g Linum usitatissimum Lus10007132.g I 0.686
Lus10016676.g Linum usitatissimum Lus10016676.g I 0.686
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.662
Pavir.Bb01629 Panicum virgatum Pavir.Bb01629 I 0.662
SELMODRAFT_438638 Selaginella moellendorffii SELMODRAFT_438638 I 0.670
PGSC0003DMG400031299 Solanum tuberosum PGSC0003DMG400031299 I 0.692
OS09G0299000 Oryza sativa OS09G0299000 I 0.662
Bra008411 Brassica rapa Bra008411 I 0.686
BRADI4G27607 Brachypodium distachyon BRADI4G27607 I 0.662
fgenesh1_pm.C_scaffold_3002126 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002126 I 0.679
GRMZM2G064197 Zea mays GRMZM2G064197 I 0.662
GSMUA_Achr3G11980_001 Musa acuminata GSMUA_Achr3G11980_001 I 0.686
LPERR09G03200 Leersia perrieri LPERR09G03200 I 0.662
MLOC_56761 Hordeum vulgare MLOC_56761 I 0.662
OBART09G04520 Oryza barthii OBART09G04520 I 0.662
ORUFI09G05100 Oryza rufipogon ORUFI09G05100 I 0.662
SapurV1A.0058s0610 Salix purpurea SapurV1A.0058s0610 I 0.686
OPUNC09G03960 Oryza punctata OPUNC09G03960 I 0.662
ONIVA09G04720 Oryza nivara ONIVA09G04720 I 0.662
OMERI09G03700 Oryza meridionalis OMERI09G03700 I 0.662
OGLUM09G05270 Oryza glumaepatula OGLUM09G05270 I 0.662
Bo9g077970 Brassica oleracea Bo9g077970 N 0.705
Bo3g064120 Brassica oleracea Bo3g064120 N 0.709
Bra029503 Brassica rapa Bra029503 N 0.735