CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10004518m.g
(
Eutrema salsugineum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Thhalv10004518m.g
T289955_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY
RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.883
0.957
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN
NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.788
0.882
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.696
0.785
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10004518m
Myb
14
61
RGRWTAEEDEILTNYIQTNGEGSWRSLPKKAGLLRCGKSCRLRWINYL
Thhalv10004518m
Myb
67
112
RGNITAEEEDIIVKLHSLLGNRWSLIATHLPGRTDNEIKNYWNSHL
Links
Other
Myb/SANT
family TFs
Other
Eutrema salsugineum
TFs
403 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy