Thhalv10005502m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10005502m.g T289973_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10005502m Myb 14 61
Thhalv10005502m Myb 67 112

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bra025337 Brassica rapa Bra025337 N 0.909
Bo7g091360 Brassica oleracea Bo7g091360 N 0.909
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.892
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.892
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.892
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.892
MYB35 Arabidopsis thaliana AT3G28470 N 0.845
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.786
MDP0000258046 Malus domestica MDP0000258046 N 0.746
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.742
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.741
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.739
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.735
Pm015813 Prunus mume Pm015813 N 0.734
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.730
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.730
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.728
TCM_045715 Theobroma cacao TCM_045715 N 0.728
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.727
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.722
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.722
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.721
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.720
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.718
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.718
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.718
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.717
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.717
Ca_10555 Cicer arietinum Ca_10555 N 0.717
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.714
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.709
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.708
TCM_018082 Theobroma cacao TCM_018082 N 0.702
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.698
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.679
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.679
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.679
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.675
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.673
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.673
mgf012871m Mimulus guttatus mgf012871m I 0.671
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.670
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.667