Thhalv10012163m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10012163m.g T290023_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB10
M07081_2.00
Arabidopsis thaliana
YYYACCWAMCHHHHNH

DNDDDDGKTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB10_col_a
0.758 0.817
AtMYB10
M07082_2.00
Arabidopsis thaliana
NYYYACCWAMCHHH

DDDGKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB10_colamp_a
0.758 0.817
MYB58
M07005_2.00
Arabidopsis thaliana
NNYYYACCWAMCHHH

DDDGKTWGGTRRRNN
Dap-seq
OMalley et al.(2016)
MYB58_col_a
0.732 0.817
MYB58
M07006_2.00
Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH

DNNNNDDDGKTWGGTRDRNND
Dap-seq
OMalley et al.(2016)
MYB58_colamp_a
0.732 0.817
MYB15
M07084_2.00
Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH

DRKTWGGTGRDDNDDNNDNNN
Dap-seq
OMalley et al.(2016)
ATY19_col_a
0.725 0.763
MYB15
M02699_2.00
Arabidopsis thaliana
CCACCTACCSBBG

CVVSGGTAGGTGG
SELEX
Mathelier et al.(2014)
MA0574.1
0.725 0.763
MYB15
M11041_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_01
0.725 0.763
MYB15
M11042_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_Q2
0.725 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012163m Myb 16 63
Thhalv10012163m Myb 69 114

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo3g185830 Brassica oleracea Bo3g185830 I 0.909
Bra030812 Brassica rapa Bra030812 I 0.909
Bostr.6758s0073 Boechera stricta Bostr.6758s0073 I 0.888
ATMYB72 Arabidopsis lyrata fgenesh2_kg.1__4638__AT1G56160.1 I 0.880
ATMYB72 Arabidopsis thaliana AT1G56160 I 0.874
Carubv10003283m.g Capsella rubella Carubv10003283m.g I 0.856
Cagra.0998s0005 Capsella grandiflora Cagra.0998s0005 I 0.856
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.815
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I 0.803
30169.m006322 Ricinus communis 30169.m006322 I 0.797
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.797
AtMYB10 Arabidopsis lyrata fgenesh2_kg.3__1346__AT3G12820.1 I 0.796
Gorai.004G269400 Gossypium raimondii Gorai.004G269400 I 0.790
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.790
SapurV1A.0284s0110 Salix purpurea SapurV1A.0284s0110 I 0.772
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I 0.768
Carubv10016289m.g Capsella rubella Carubv10016289m.g I 0.766
Bostr.3640s0057 Boechera stricta Bostr.3640s0057 I 0.766
MTR_2g067420 Medicago truncatula MTR_2g067420 I 0.766
Cagra.5641s0047 Capsella grandiflora Cagra.5641s0047 I 0.766
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I 0.764
TCM_032927 Theobroma cacao TCM_032927 I 0.760
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.758
Bra014929 Brassica rapa Bra014929 I 0.758
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.758
AtMYB10 Arabidopsis thaliana AT3G12820 D 0.758
Bo3g081700 Brassica oleracea Bo3g081700 I 0.758
Bo7g040780 Brassica oleracea Bo7g040780 I 0.758
Bra001907 Brassica rapa Bra001907 I 0.758
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.758
Bra035097 Brassica rapa Bra035097 I 0.756
Thhalv10021926m.g Eutrema salsugineum Thhalv10021926m.g I 0.756
Pm011057 Prunus mume Pm011057 I 0.755
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.755
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.755
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.753
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.753
Bo3g065150 Brassica oleracea Bo3g065150 I 0.753
GLYMA08G17861 Glycine max GLYMA08G17861 I 0.751
GLYMA15G41255 Glycine max GLYMA15G41255 I 0.751
Cucsa.118450 Cucumis sativus Cucsa.118450 I 0.751
Cla013669 Citrullus lanatus Cla013669 I 0.751
Bo1g138940 Brassica oleracea Bo1g138940 I 0.749
MDP0000215675 Malus domestica MDP0000215675 I 0.746
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I 0.742
MDP0000133542 Malus domestica MDP0000133542 I 0.742
Carubv10015750m.g Capsella rubella Carubv10015750m.g I 0.741
Bra001472 Brassica rapa Bra001472 I 0.738
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.735
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I 0.735
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I 0.735
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.735
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I 0.735
Bo6g122640 Brassica oleracea Bo6g122640 I 0.735
Bra003619 Brassica rapa Bra003619 I 0.732
MYB58 Arabidopsis thaliana AT1G16490 D 0.732
Bo6g081140 Brassica oleracea Bo6g081140 I 0.732
Pm009364 Prunus mume Pm009364 I 0.730
F775_30010 Aegilops tauschii F775_30010 I 0.727
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.726
Bra039344 Brassica rapa Bra039344 I 0.726
ATMYB63 Arabidopsis thaliana AT1G79180 D 0.726
MYB15 Arabidopsis thaliana AT3G23250 D 0.725
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I 0.725
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I 0.723
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I 0.723
Carubv10011190m.g Capsella rubella Carubv10011190m.g I 0.723
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I 0.723
Bo8g105490 Brassica oleracea Bo8g105490 I 0.723
Bra026720 Brassica rapa Bra026720 I 0.723
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.722
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.722
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.721
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.719
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.719
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.719
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.717
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I 0.717
OS02G0695200 Oryza sativa OS02G0695200 I 0.715
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.715
OBART02G28790 Oryza barthii OBART02G28790 I 0.715
Cucsa.383620 Cucumis sativus Cucsa.383620 I 0.715
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.715
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.715
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.715
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.715
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.715
Cla007705 Citrullus lanatus Cla007705 I 0.715
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.715
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.715
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I 0.714
PK20358.1 Cannabis sativa PK20358.1 I 0.713
MDP0000230141 Malus domestica MDP0000230141 I 0.713
MDP0000435315 Malus domestica MDP0000435315 I 0.713
PRUPE_ppa020190mg Prunus persica PRUPE_ppa020190mg I 0.713
GSMUA_Achr4G28850_001 Musa acuminata GSMUA_Achr4G28850_001 I 0.710
MTR_7g096930 Medicago truncatula MTR_7g096930 I 0.709
Bo1g102190 Brassica oleracea Bo1g102190 I 0.708
Bra023742 Brassica rapa Bra023742 I 0.708
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.707
Traes_6DL_991931CF9 Triticum aestivum Traes_6DL_991931CF9 I 0.706
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.706
MLOC_43806 Hordeum vulgare MLOC_43806 I 0.706
Traes_6DL_BBAC725C3 Triticum aestivum Traes_6DL_BBAC725C3 I 0.706
MLOC_34646 Hordeum vulgare MLOC_34646 I 0.706
Traes_6BL_E5A9546C9 Triticum aestivum Traes_6BL_E5A9546C9 I 0.706
TRIUR3_12302 Triticum urartu TRIUR3_12302 I 0.706
BRADI3G49180 Brachypodium distachyon BRADI3G49180 I 0.706
Si010814m.g Setaria italica Si010814m.g I 0.705
Sb06g022660 Sorghum bicolor Sb06g022660 I 0.705
GRMZM2G048295 Zea mays GRMZM2G048295 I 0.705
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.705
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.705
Thhalv10018933m.g Eutrema salsugineum Thhalv10018933m.g I 0.705
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.704
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.704
OB02G35920 Oryza brachyantha OB02G35920 I 0.702
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.701
Si017704m.g Setaria italica Si017704m.g I 0.698
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.698
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.698
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.698
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.698
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.698
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.698
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.698
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.698
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.698
F775_18231 Aegilops tauschii F775_18231 I 0.698
GSMUA_Achr11G17870_001 Musa acuminata GSMUA_Achr11G17870_001 I 0.698
F775_29501 Aegilops tauschii F775_29501 I 0.697
Traes_6AL_E1D3D8DAA1 Triticum aestivum Traes_6AL_E1D3D8DAA1 I 0.697
BRADI3G49190 Brachypodium distachyon BRADI3G49190 I 0.696
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.695
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.695
Si018182m.g Setaria italica Si018182m.g I 0.695
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.694
Traes_6AL_54D562BC2 Triticum aestivum Traes_6AL_54D562BC2 I 0.693
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.693
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.693
F775_14744 Aegilops tauschii F775_14744 I 0.693
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.693
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.693
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.693
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.693
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.693
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.692
Ca_12226 Cicer arietinum Ca_12226 I 0.692
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.692
VIT_05s0049g01010 Vitis vinifera VIT_05s0049g01010 I 0.692
OB04G30570 Oryza brachyantha OB04G30570 I 0.692
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.692
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.692
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.692
OBART04G23680 Oryza barthii OBART04G23680 I 0.692
Bra021708 Brassica rapa Bra021708 I 0.692
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.692
OS04G0594100 Oryza sativa OS04G0594100 I 0.692
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.692
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.692
Si010384m.g Setaria italica Si010384m.g I 0.691
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.690
Lus10031758.g Linum usitatissimum Lus10031758.g I 0.690
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.689
OB04G25860 Oryza brachyantha OB04G25860 I 0.688
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.688
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.687
Ca_12130 Cicer arietinum Ca_12130 I 0.687
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.687
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.687
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.686
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.685
Pm020596 Prunus mume Pm020596 I 0.685
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.685
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.684
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I 0.683
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.683
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.683
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.683
PGSC0003DMG400023405 Solanum tuberosum PGSC0003DMG400023405 I 0.682
Solyc05g055030.1 Solanum lycopersicum Solyc05g055030.1 I 0.682
PGSC0003DMG400020071 Solanum tuberosum PGSC0003DMG400020071 I 0.682
Solyc06g083900.2 Solanum lycopersicum Solyc06g083900.2 I 0.682
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.681
PK08038.1 Cannabis sativa PK08038.1 I 0.681
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.680
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.680
Aquca_017_00716 Aquilegia coerulea Aquca_017_00716 I 0.678
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I 0.677
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.677
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.677
MYB30 Oryza sativa OS02G0624300 I 0.677
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.677
OB02G31990 Oryza brachyantha OB02G31990 I 0.677
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.677
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.676
Traes_6DL_FCDEB9A8B Triticum aestivum Traes_6DL_FCDEB9A8B I 0.676
PK03488.1 Cannabis sativa PK03488.1 I 0.676
TCM_020889 Theobroma cacao TCM_020889 I 0.676
F775_27569 Aegilops tauschii F775_27569 I 0.676
cassava4659.m1 Manihot esculenta cassava4659.m1 I 0.675
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.675
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.675
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.674
Lus10021871.g Linum usitatissimum Lus10021871.g I 0.674
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.673
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.672
Cla021845 Citrullus lanatus Cla021845 I 0.670
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.670
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.670
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.670
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.668
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.668
MDP0000897594 Malus domestica MDP0000897594 I 0.668
MYB14 Arabidopsis thaliana AT2G31180 I 0.668
Bra018267 Brassica rapa Bra018267 I 0.668
Bo4g176030 Brassica oleracea Bo4g176030 I 0.668
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.668
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.668
Bo4g176020 Brassica oleracea Bo4g176020 I 0.668
MDP0000168728 Malus domestica MDP0000168728 I 0.667
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.667
Cla019747 Citrullus lanatus Cla019747 I 0.667
Cucsa.126220 Cucumis sativus Cucsa.126220 I 0.667
MTR_1g043080 Medicago truncatula MTR_1g043080 I 0.667
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.667
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.666
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.666
Bo3g025100 Brassica oleracea Bo3g025100 I 0.665
MTR_1g043050 Medicago truncatula MTR_1g043050 I 0.665
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.665
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.665
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I 0.665
F775_32664 Aegilops tauschii F775_32664 I 0.665
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.664
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.664
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.664
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.664
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.664
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I 0.664
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.664
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.663
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.663
LPERR06G00600 Leersia perrieri LPERR06G00600 I 0.663
Cla006077 Citrullus lanatus Cla006077 I 0.663
MDP0000145050 Malus domestica MDP0000145050 I 0.662
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.661
Pm015303 Prunus mume Pm015303 I 0.661
POPTR_0019s07760 Populus trichocarpa POPTR_0019s07760 I 0.661