CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFA79332.1
(
Polysphondylium pallidum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
EFA79332.1
T290255_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mybAA
M02315_2.00
Dictyostelium discoideum
NWAHCNNYNN
NNRNNGDTWN
PBM
Weirauch et al.(2014)
pTH5409
0.826
0.882
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA79332.1
Myb
632
678
KGHWTKEEDEMLRALVEKYGTKRWKYIASLLGLRNGRQCRERWSNQL
EFA79332.1
Myb
684
729
RDAWTLNEDKIILEAHAKFGNKWAEISKLLPGRTNCAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Polysphondylium pallidum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.272.22.1
Dictyostelium purpureum
e_gw1.272.22.1
I
0.830
mybAA
Dictyostelium discoideum
DDB_G0268368
D
0.826