CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP002256
(
Lucilia cuprina
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
LCUP002256
T290288_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myb
M03918_2.00
Drosophila melanogaster
NRAWAACCGTTAVR
YBTAACGGTTWTYN
SELEX
Nitta et al.(2015)
Myb_1
0.738
0.835
Myb
M03919_2.00
Drosophila melanogaster
YNTAACGGTHDNHH
DDNHDACCGTTANR
SELEX
Nitta et al.(2015)
Myb_2
0.738
0.835
Myb
M03920_2.00
Drosophila melanogaster
NDAWWACCGTTACD
HGTAACGGTWWTHN
SELEX
Nitta et al.(2015)
Myb_3
0.738
0.835
Myb
M03921_2.00
Drosophila melanogaster
DDDTDACCGTTACD
HGTAACGGTHAHHH
SELEX
Nitta et al.(2015)
Myb_4
0.738
0.835
Myb
M08215_2.00
Drosophila melanogaster
MARYTGCAK
MTGCARYTK
ChIP-seq
Contrino et al.(2012)
Mf27
0.738
0.835
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP002256-PA
Myb
55
100
GKRWSKSEDTLLKTLVEQHGDRWDLIAPHFKDRTEPQVQQRWAKVL
LCUP002256-PA
Myb
106
152
KGPWTKEEDEKVMELVRRFGPKKWTLIARYLNGRIGKQCRERWHNHL
LCUP002256-PA
Myb
158
203
KTAWTEEEDRIIYQAHMQWGNQWAKIAKLLPGRTDNAIKNHWNSTM
Links
Other
Myb/SANT
family TFs
Other
Lucilia cuprina
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy