CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK00827.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK00827.1
T290329_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK00827.1
Myb
236
287
RIRWTQDLHEKFVECANRLGGADKATPKAILKLMETEGLTIFHVKSHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_14198
Cicer arietinum
Ca_14198
N
0.879
fgenesh2_kg.6__627__AT5G06800.1
Arabidopsis lyrata
fgenesh2_kg.6__627__AT5G06800.1
N
0.848
Cla011853
Citrullus lanatus
Cla011853
N
0.848
Thhalv10013850m.g
Eutrema salsugineum
Thhalv10013850m.g
N
0.848
SapurV1A.0251s0040
Salix purpurea
SapurV1A.0251s0040
N
0.848
Lus10021035.g
Linum usitatissimum
Lus10021035.g
N
0.848
orange1.1g018583m.g
Citrus sinensis
orange1.1g018583m.g
N
0.848
Bra028717
Brassica rapa
Bra028717
N
0.848
Ciclev10012014m.g
Citrus clementina
Ciclev10012014m.g
N
0.848
Cucsa.353890
Cucumis sativus
Cucsa.353890
N
0.848
cassava39743.m1
Manihot esculenta
cassava39743.m1
N
0.848
Bo2g007410
Brassica oleracea
Bo2g007410
N
0.848
Bostr.13129s0292
Boechera stricta
Bostr.13129s0292
N
0.848
28582.m000316
Ricinus communis
28582.m000316
N
0.848
cassava12254.valid.m1
Manihot esculenta
cassava12254.valid.m1
N
0.848
cassava12255.valid.m1
Manihot esculenta
cassava12255.valid.m1
N
0.848
Lus10023816.g
Linum usitatissimum
Lus10023816.g
N
0.847
GLYMA09G17404
Glycine max
GLYMA09G17404
N
0.840
POPTR_0006s20540
Populus trichocarpa
POPTR_0006s20540
N
0.840
MTR_1g053835
Medicago truncatula
MTR_1g053835
N
0.840
evm.TU.supercontig_85.82
Carica papaya
evm.TU.supercontig_85.82
N
0.833
Gorai.006G142000
Gossypium raimondii
Gorai.006G142000
N
0.833
Gorai.002G225400
Gossypium raimondii
Gorai.002G225400
N
0.830
PRUPE_ppa016067mg
Prunus persica
PRUPE_ppa016067mg
N
0.830
TCM_024886
Theobroma cacao
TCM_024886
N
0.830
Pm025973
Prunus mume
Pm025973
N
0.830
POPTR_0016s04830
Populus trichocarpa
POPTR_0016s04830
N
0.830
gene22647-v1.0-hybrid
Fragaria vesca
gene22647-v1.0-hybrid
N
0.830
AT5G06800
Arabidopsis thaliana
AT5G06800
N
0.830
SapurV1A.0018s0530
Salix purpurea
SapurV1A.0018s0530
N
0.830
MDP0000253656
Malus domestica
MDP0000253656
N
0.830
MDP0000184307
Malus domestica
MDP0000184307
N
0.830
Bra005912
Brassica rapa
Bra005912
N
0.824
Bo3g004040
Brassica oleracea
Bo3g004040
N
0.824
MDP0000280005
Malus domestica
MDP0000280005
N
0.824
chr5.LjT42I01.50.nd
Lotus japonicus
chr5.LjT42I01.50.nd
I
0.819
mgf007532m
Mimulus guttatus
mgf007532m
N
0.805
mgf007985m
Mimulus guttatus
mgf007985m
N
0.805
GLYMA02G30800
Glycine max
GLYMA02G30800
N
0.800
GLYMA03G29940
Glycine max
GLYMA03G29940
I
0.796
MTR_7g093030
Medicago truncatula
MTR_7g093030
N
0.796
GLYMA19G32850
Glycine max
GLYMA19G32850
I
0.796
Bo9g175820
Brassica oleracea
Bo9g175820
I
0.788
Carubv10003217m.g
Capsella rubella
Carubv10003217m.g
N
0.788
Cagra.8005s0016
Capsella grandiflora
Cagra.8005s0016
N
0.788
PGSC0003DMG400011435
Solanum tuberosum
PGSC0003DMG400011435
N
0.781
Solyc10g078720.1
Solanum lycopersicum
Solyc10g078720.1
N
0.781
GSMUA_Achr4G19300_001
Musa acuminata
GSMUA_Achr4G19300_001
I
0.780
Bra009228
Brassica rapa
Bra009228
I
0.770
28582.m000318
Ricinus communis
28582.m000318
N
0.769
Eucgr.A02444
Eucalyptus grandis
Eucgr.A02444
N
0.767
VIT_08s0007g06310
Vitis vinifera
VIT_08s0007g06310
I
0.765
GSMUA_Achr7G06370_001
Musa acuminata
GSMUA_Achr7G06370_001
I
0.758
mgf017208m
Mimulus guttatus
mgf017208m
N
0.756
30226.m001993
Ricinus communis
30226.m001993
N
0.750
28582.m000317
Ricinus communis
28582.m000317
N
0.750
cassava12253.valid.m1
Manihot esculenta
cassava12253.valid.m1
N
0.749
VIT_08s0007g06180
Vitis vinifera
VIT_08s0007g06180
I
0.743
Aquca_009_00165
Aquilegia coerulea
Aquca_009_00165
N
0.739
Aquca_012_00204
Aquilegia coerulea
Aquca_012_00204
N
0.739
AMTR_s00022p00190540
Amborella trichopoda
AMTR_s00022p00190540
I
0.738
chr1.LjT38A19.30.nc
Lotus japonicus
chr1.LjT38A19.30.nc
N
0.734
orange1.1g035950m.g
Citrus sinensis
orange1.1g035950m.g
N
0.721
Ciclev10033388m.g
Citrus clementina
Ciclev10033388m.g
N
0.721
PDK_20s1349221g001
Phoenix dactylifera
PDK_20s1349221g001
N
0.706
Ca_07304
Cicer arietinum
Ca_07304
I
0.695
SapurV1A.0008s0360
Salix purpurea
SapurV1A.0008s0360
N
0.686
SapurV1A.4156s0010
Salix purpurea
SapurV1A.4156s0010
N
0.686
AMTR_s00025p00224230
Amborella trichopoda
AMTR_s00025p00224230
I
0.681
Pavir.Ga00160
Panicum virgatum
Pavir.Ga00160
I
0.678
OBART04G28680
Oryza barthii
OBART04G28680
I
0.678
OB04G35670
Oryza brachyantha
OB04G35670
I
0.678
LPERR04G24240
Leersia perrieri
LPERR04G24240
I
0.678
BRADI5G25320
Brachypodium distachyon
BRADI5G25320
I
0.678
GRMZM2G124495
Zea mays
GRMZM2G124495
I
0.678
OGLUM04G28560
Oryza glumaepatula
OGLUM04G28560
I
0.678
BGIOSGA014151
Oryza indica
BGIOSGA014151
I
0.678
OLONG_005000
Oryza longistaminata
OLONG_005000
I
0.678
OS04G0665600
Oryza sativa
OS04G0665600
I
0.678
Sb06g031970
Sorghum bicolor
Sb06g031970
I
0.678
Si022099m.g
Setaria italica
Si022099m.g
I
0.678
VIT_13s0156g00390
Vitis vinifera
VIT_13s0156g00390
I
0.678
ORUFI04G30350
Oryza rufipogon
ORUFI04G30350
I
0.678
ORGLA04G0249600
Oryza glaberrima
ORGLA04G0249600
I
0.678
OMERI04G24260
Oryza meridionalis
OMERI04G24260
I
0.678
ONIVA04G27220
Oryza nivara
ONIVA04G27220
I
0.678
OPUNC04G26200
Oryza punctata
OPUNC04G26200
I
0.678
cassava16780.m1
Manihot esculenta
cassava16780.m1
I
0.671
POPTR_0001s23560
Populus trichocarpa
POPTR_0001s23560
N
0.671
MTR_7g068600
Medicago truncatula
MTR_7g068600
N
0.666
Lus10022886.g
Linum usitatissimum
Lus10022886.g
I
0.666
Pavir.J05593
Panicum virgatum
Pavir.J05593
I
0.666