PK01212.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK01212.1 T290336_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.727 0.763
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.727 0.763
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.714 0.774
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.714 0.774
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.714 0.763
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.714 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK01212.1 Myb 27 73
PK01212.1 Myb 79 124

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

379 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCHOG00000011634 Choloepus hoffmanni ENSCHOG00000011634 I 0.000
ENSMEUG00000006389 Macropus eugenii ENSMEUG00000006389 I 0.000
ETS2 Vicugna pacos ENSVPAG00000002062 I 0.000
ETS2 Erinaceus europaeus ENSEEUG00000015949 I 0.000
ETV1 Tupaia belangeri ENSTBEG00000014625 N 0.000
ETV5 Procavia capensis ENSPCAG00000011636 I 0.000
ETV5 Vicugna pacos ENSVPAG00000012018 I 0.000
ETV5 Erinaceus europaeus ENSEEUG00000003754 I 0.000
FLI1 Microcebus murinus ENSMICG00000016730 N 0.000
SPDEF Tupaia belangeri ENSTBEG00000015013 N 0.000
SPDEF Procavia capensis ENSPCAG00000000551 N 0.000