PK05123.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK05123.1 T290353_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB124
M01267_2.00 		Arabidopsis thaliana
NNVCGCKCBN
NVGMGCGBNN		 PBM
Lambert et al.(2019)
pTH11556 		0.808 0.879
MYB88
M07042_2.00 		Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN		 Dap-seq
OMalley et al.(2016)
MYB88_col_a 		0.780 0.857
MYB88
M07043_2.00 		Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN		 Dap-seq
OMalley et al.(2016)
MYB88_colamp_a 		0.780 0.857
MYB88
M11038_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB88_01 		0.780 0.857
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK05123.1 Myb 25 70
PK05123.1 Myb 76 120

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

Invalid Input OrderBy

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action