PK09202.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK09202.1 T290383_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.662 0.723
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.662 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK09202.1 Myb 221 271

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw1.49.140.1 Volvox carteri gw1.49.140.1 N 0.777
Traes_1AL_43D709979 Triticum aestivum Traes_1AL_43D709979 N 0.767
CHLREDRAFT_130971 Chlamydomonas reinhardtii CHLREDRAFT_130971 I 0.744
Bra020652 Brassica rapa Bra020652 N 0.729
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.710
gene15029-v1.0-hybrid Fragaria vesca gene15029-v1.0-hybrid I 0.710
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.704
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.701
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.701
OSTLU_26838 Ostreococcus lucimarinus OSTLU_26838 I 0.695
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.695
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.695
gw1.12.455.1 Ostreococcus RCC809 gw1.12.455.1 I 0.695
MTR_2g450070 Medicago truncatula MTR_2g450070 N 0.688
Lus10036303.g Linum usitatissimum Lus10036303.g I 0.684
Pm027701 Prunus mume Pm027701 I 0.683
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.683
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.683
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.683
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.683
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.683
mgf001591m Mimulus guttatus mgf001591m I 0.683
Bo00847s030 Brassica oleracea Bo00847s030 N 0.683
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.683
mgf014863m Mimulus guttatus mgf014863m I 0.683
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.683
GLYMA08G05165 Glycine max GLYMA08G05165 N 0.682
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.668
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.668
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.668
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.668
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.668
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.668
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.668
Bra020390 Brassica rapa Bra020390 I 0.668
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.668
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.668
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.668
TCM_037098 Theobroma cacao TCM_037098 I 0.668
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.668
29737.m001227 Ricinus communis 29737.m001227 I 0.668
Bo2g028820 Brassica oleracea Bo2g028820 I 0.668
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.667
Pavir.Db00644 Panicum virgatum Pavir.Db00644 I 0.665
BRADI2G11400 Brachypodium distachyon BRADI2G11400 N 0.665
Lus10019058.g Linum usitatissimum Lus10019058.g I 0.665
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.665
Thhalv10022243m.g Eutrema salsugineum Thhalv10022243m.g N 0.664
ARR14 Arabidopsis thaliana AT2G01760 D 0.662
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.662
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.661
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.661
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.661
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.661
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.661