CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK09202.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK09202.1
T290383_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.662
0.723
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.662
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK09202.1
Myb
221
271
RVVWSPELHKKFCAAVHKLGPEKAVPKKILDMMNEEGLTRENVASHLQKYR
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw1.49.140.1
Volvox carteri
gw1.49.140.1
N
0.777
Traes_1AL_43D709979
Triticum aestivum
Traes_1AL_43D709979
N
0.767
CHLREDRAFT_130971
Chlamydomonas reinhardtii
CHLREDRAFT_130971
I
0.744
Bra020652
Brassica rapa
Bra020652
N
0.729
GLYMA05G34516
Glycine max
GLYMA05G34516
I
0.710
gene15029-v1.0-hybrid
Fragaria vesca
gene15029-v1.0-hybrid
I
0.710
chr6.CM0037.920.nc
Lotus japonicus
chr6.CM0037.920.nc
I
0.704
PGSC0003DMG400007823
Solanum tuberosum
PGSC0003DMG400007823
I
0.701
Solyc12g010330.1
Solanum lycopersicum
Solyc12g010330.1
I
0.701
OSTLU_26838
Ostreococcus lucimarinus
OSTLU_26838
I
0.695
Ciclev10007648m.g
Citrus clementina
Ciclev10007648m.g
I
0.695
orange1.1g005719m.g
Citrus sinensis
orange1.1g005719m.g
I
0.695
gw1.12.455.1
Ostreococcus RCC809
gw1.12.455.1
I
0.695
MTR_2g450070
Medicago truncatula
MTR_2g450070
N
0.688
Lus10036303.g
Linum usitatissimum
Lus10036303.g
I
0.684
Pm027701
Prunus mume
Pm027701
I
0.683
evm.TU.supercontig_46.117
Carica papaya
evm.TU.supercontig_46.117
I
0.683
Eucgr.C00380
Eucalyptus grandis
Eucgr.C00380
I
0.683
VIT_11s0206g00060
Vitis vinifera
VIT_11s0206g00060
I
0.683
PGSC0003DMG400003196
Solanum tuberosum
PGSC0003DMG400003196
I
0.683
Gorai.009G054200
Gossypium raimondii
Gorai.009G054200
I
0.683
mgf001591m
Mimulus guttatus
mgf001591m
I
0.683
Bo00847s030
Brassica oleracea
Bo00847s030
N
0.683
Solyc07g005140.2
Solanum lycopersicum
Solyc07g005140.2
I
0.683
mgf014863m
Mimulus guttatus
mgf014863m
I
0.683
PRUPE_ppa018934mg
Prunus persica
PRUPE_ppa018934mg
I
0.683
GLYMA08G05165
Glycine max
GLYMA08G05165
N
0.682
Bostr.26833s0442
Boechera stricta
Bostr.26833s0442
I
0.668
Gorai.001G030600
Gossypium raimondii
Gorai.001G030600
I
0.668
Thhalv10015296m.g
Eutrema salsugineum
Thhalv10015296m.g
I
0.668
Gorai.004G291100
Gossypium raimondii
Gorai.004G291100
I
0.668
Carubv10026052m.g
Capsella rubella
Carubv10026052m.g
I
0.668
Cagra.0891s0003
Capsella grandiflora
Cagra.0891s0003
I
0.668
cassava262.valid.m1
Manihot esculenta
cassava262.valid.m1
I
0.668
Bra020390
Brassica rapa
Bra020390
I
0.668
GLYMA15G24770
Glycine max
GLYMA15G24770
I
0.668
cassava37075.valid.m1
Manihot esculenta
cassava37075.valid.m1
I
0.668
GLYMA09G14650
Glycine max
GLYMA09G14650
I
0.668
TCM_037098
Theobroma cacao
TCM_037098
I
0.668
cassava37074.valid.m1
Manihot esculenta
cassava37074.valid.m1
I
0.668
29737.m001227
Ricinus communis
29737.m001227
I
0.668
Bo2g028820
Brassica oleracea
Bo2g028820
I
0.668
chr5.CM0345.260.nd
Lotus japonicus
chr5.CM0345.260.nd
I
0.667
Pavir.Db00644
Panicum virgatum
Pavir.Db00644
I
0.665
BRADI2G11400
Brachypodium distachyon
BRADI2G11400
N
0.665
Lus10019058.g
Linum usitatissimum
Lus10019058.g
I
0.665
VIT_16s0100g00420
Vitis vinifera
VIT_16s0100g00420
I
0.665
Thhalv10022243m.g
Eutrema salsugineum
Thhalv10022243m.g
N
0.664
ARR14
Arabidopsis thaliana
AT2G01760
D
0.662
ARR14
Arabidopsis lyrata
scaffold_500093.1
I
0.662
SapurV1A.0347s0250
Salix purpurea
SapurV1A.0347s0250
I
0.661
orange1.1g009670m.g
Citrus sinensis
orange1.1g009670m.g
I
0.661
POPTR_0018s11960
Populus trichocarpa
POPTR_0018s11960
I
0.661
SapurV1A.0100s0230
Salix purpurea
SapurV1A.0100s0230
I
0.661
POPTR_0006s20220
Populus trichocarpa
POPTR_0006s20220
I
0.661