CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK15104.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK15104.1
T290412_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G11280
M01075_2.00
Arabidopsis thaliana
NNTTATCNNN
NNNGATAANN
PBM
Sullivan et al.(2014)
pTH7245
0.752
0.819
AT3G11280
M07074_2.00
Arabidopsis thaliana
DWDWDGATAAKRWW
WWYMTTATCHWHWH
Dap-seq
OMalley et al.(2016)
At3g11280_col_a
0.752
0.819
AT3G11280
M07075_2.00
Arabidopsis thaliana
NNWNNDGATAAGRWHDNN
NNHDWYCTTATCHNNWNN
Dap-seq
OMalley et al.(2016)
At3g11280_colamp_a
0.752
0.819
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK15104.1
Myb
131
178
GVPWTKDEHTRFLLGLMKYGKGDWRNISRNFVITKTPTQVASHAQKYY
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy