PK21166.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK21166.1 T290451_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21166.1
M01281_2.00		 Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.789 0.914
MYB99
M07151_2.00 		Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB99_col_a 		0.682 0.763
MYB99
M07152_2.00 		Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR		 Dap-seq
OMalley et al.(2016)
MYB99_colamp_a 		0.682 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01281_2.00 Myb 24 71
M01281_2.00 Myb 77 122

DNA Binding Domains

Protein ID Domain From To Sequence
PK21166.1 Myb 24 71
PK21166.1 Myb 77 122

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

Invalid Input OrderBy

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action