PK25885.1 (Cannabis sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PK25885.1 T290476_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASR3
M07053_2.00 		Arabidopsis thaliana
DNNNNHHWNDRCCCTWAW
WTWAGGGYHNWDDNNNNH		 Dap-seq
OMalley et al.(2016)
AT2G33550_col_a 		0.765 0.935
ASR3
M07054_2.00 		Arabidopsis thaliana
NHWDDTRCCCTWMW
WKWAGGGYAHHWDN		 Dap-seq
OMalley et al.(2016)
AT2G33550_colamp_a 		0.765 0.935
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK25885.1 Myb 59 126

Links

Other Myb/SANT family TFs
Other Cannabis sativa TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I 0.854
Bostr.23794s0746 Boechera stricta Bostr.23794s0746 I 0.804
Cla001502 Citrullus lanatus Cla001502 I 0.804
Carubv10023675m.g Capsella rubella Carubv10023675m.g I 0.804
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I 0.804
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I 0.804
Bo4g043600 Brassica oleracea Bo4g043600 I 0.804
Bra005486 Brassica rapa Bra005486 I 0.804
Bo4g182020 Brassica oleracea Bo4g182020 I 0.804
Bra021860 Brassica rapa Bra021860 I 0.804
GLYMA18G51790 Glycine max GLYMA18G51790 I 0.792
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I 0.792
GLYMA08G28880 Glycine max GLYMA08G28880 I 0.792
MDP0000232058 Malus domestica MDP0000232058 I 0.784
AMTR_s00025p00072580 Amborella trichopoda AMTR_s00025p00072580 I 0.775
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I 0.765
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I 0.765
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I 0.765
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I 0.765
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I 0.765
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I 0.765
30128.m008552 Ricinus communis 30128.m008552 I 0.765
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I 0.765
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I 0.765
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I 0.765
ASR3 Arabidopsis thaliana AT2G33550 D 0.765
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I 0.765
mgf009760m Mimulus guttatus mgf009760m I 0.765
Cucsa.349220 Cucumis sativus Cucsa.349220 I 0.765
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I 0.757
SapurV1A.0499s0110 Salix purpurea SapurV1A.0499s0110 I 0.757
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I 0.745
Si017674m.g Setaria italica Si017674m.g I 0.715
Pm024597 Prunus mume Pm024597 I 0.678
VIT_17s0000g00270 Vitis vinifera VIT_17s0000g00270 I 0.671