CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK28164.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK28164.1
T290489_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB05_ANTMA
M11067_2.00
Antirrhinum majus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.738
0.936
MYB24
M02311_2.00
Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY
PBM
Weirauch et al.(2014)
pTH8662
0.735
0.923
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT
ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.699
0.859
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.699
0.859
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY
RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.699
0.859
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK28164.1
Myb
1
33
IANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYL
PK28164.1
Myb
39
84
RGNITNEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRI
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy